RNA–Protein interactions for RNA: ENST00000541852.5

ITM2C-208, Transcript of integral membrane protein 2C, humanhuman

TSL 3

Gene ITM2C, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-208ENST00000541852 SMARCC2Q8TAQ2 1214 aa17.23■□□□□ 0.35
ITM2C-208ENST00000541852 CDHR1Q96JP9 859 aa17.23■□□□□ 0.35
ITM2C-208ENST00000541852 ZNF215Q9UL58 517 aaPredicted RBP17.23■□□□□ 0.35
ITM2C-208ENST00000541852 BDP1A6H8Y1 2624 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 CALM1P0DP23 149 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 CALM2P0DP24 149 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 CALM3P0DP25 149 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 HOXC8P31273 242 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 MCM5P33992 734 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 DEFB103AP81534 67 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 MRPS9P82933 396 aaKnown RBP17.22■□□□□ 0.35
ITM2C-208ENST00000541852 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
ITM2C-208ENST00000541852 SLC35G1Q2M3R5 365 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 PCNX4Q63HM2 1172 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 TRAF7Q6Q0C0 670 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 NLRX1Q86UT6 975 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 TMEM87BQ96K49 555 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 RNPEPQ9H4A4 650 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 XIRP2A4UGR9 3374 aa17.22■□□□□ 0.35
ITM2C-208ENST00000541852 EPOPA6NHQ4 379 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 LGALS2P05162 132 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 SMIM10L2AP0DMW4 78 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 SMIM10L2BP0DMW5 78 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 CYFIP1Q7L576 1253 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 MB21D2Q8IYB1 491 aaPredicted RBP17.21■□□□□ 0.35
ITM2C-208ENST00000541852 ZNF654Q8IZM8 581 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 DBF4BQ8NFT6 615 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 SEPT8Q92599 483 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 SAMD11Q96NU1 681 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
ITM2C-208ENST00000541852 REV3LO60673 3130 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 CCDC69A6NI79 296 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 MAFGO15525 162 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 LPXNO60711 386 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 LIFRP42702 1097 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 APBB2Q92870 758 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 GPR20Q99678 358 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 C1QTNF1Q9BXJ1 281 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 SUGCTQ9HAC7 445 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 LY9Q9HBG7 655 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 RBM8AQ9Y5S9 174 aaKnown RBP17.2■□□□□ 0.34
ITM2C-208ENST00000541852 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
ITM2C-208ENST00000541852 LCHNA4D1U4 455 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 TREHO43280 583 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 SORBS3O60504 671 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 ARHGEF15O94989 841 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 RPLP2P05387 115 aaKnown RBP17.19■□□□□ 0.34
ITM2C-208ENST00000541852 ANTXR2P58335 489 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 TFF2Q03403 129 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 GPKOWQ92917 476 aaPredicted RBP eCLIP17.19■□□□□ 0.34
ITM2C-208ENST00000541852 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
ITM2C-208ENST00000541852 WNT8BQ93098 351 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 PSTPIP2Q9H939 334 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 RTEL1Q9NZ71 1219 aa17.19■□□□□ 0.34
ITM2C-208ENST00000541852 KAT6AQ92794 2004 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 LINC01553A4QN01 128 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 MEIS2O14770 477 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 PRC1O43663 620 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 HTRA4P83105 476 aaPredicted RBP17.18■□□□□ 0.34
ITM2C-208ENST00000541852 HIC1Q14526 733 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 FAM26DQ5JW98 314 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 RPAINQ86UA6 219 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 PIBF1Q8WXW3 757 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 TOP1MTQ969P6 601 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 GPRASP2Q96D09 838 aa17.18■□□□□ 0.34
ITM2C-208ENST00000541852 TCF20Q9UGU0 1960 aaKnown RBP17.17■□□□□ 0.34
ITM2C-208ENST00000541852 COL9A1P20849 921 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 PTPROQ16827 1216 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 KRT40Q6A162 431 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 TAF2Q6P1X5 1199 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.17■□□□□ 0.34
ITM2C-208ENST00000541852 RSPH3Q86UC2 560 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 MYOCDQ8IZQ8 938 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
ITM2C-208ENST00000541852 EHMT1Q9H9B1 1298 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 SETD4Q9NVD3 440 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
ITM2C-208ENST00000541852 KCNQ1P51787 676 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 ADAM17P78536 824 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 MKRN4PQ13434 485 aaPredicted RBP17.16■□□□□ 0.34
ITM2C-208ENST00000541852 TCTN1Q2MV58 587 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 SYNE3Q6ZMZ3 975 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 TMCO2Q7Z6W1 182 aaPredicted RBP17.16■□□□□ 0.34
ITM2C-208ENST00000541852 SRBD1Q8N5C6 995 aaKnown RBP17.16■□□□□ 0.34
ITM2C-208ENST00000541852 FBXO22Q8NEZ5 403 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 SP7Q8TDD2 431 aaPredicted RBP17.16■□□□□ 0.34
ITM2C-208ENST00000541852 SEPT1Q8WYJ6 367 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 BCAS3Q9H6U6 928 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 TAF6LQ9Y6J9 622 aa17.16■□□□□ 0.34
ITM2C-208ENST00000541852 PTPRSQ13332 1948 aa17.15■□□□□ 0.34
ITM2C-208ENST00000541852 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
ITM2C-208ENST00000541852 ARHGAP4P98171 946 aa17.15■□□□□ 0.34
ITM2C-208ENST00000541852 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
ITM2C-208ENST00000541852 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms