RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 ATAT1Q5SQI0 421 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 GJC2Q5T442 439 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 MAMDC2Q7Z304 686 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 LMNTD2Q8IXW0 634 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 OR2C3Q8N628 320 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 MYCT1Q8N699 235 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 USP13Q92995 863 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 MAGEB10Q96LZ2 347 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 SEC62Q99442 399 aaKnown RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 EMILIN2Q9BXX0 1053 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 SMC4Q9NTJ3 1288 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 NKIRAS2Q9NYR9 191 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 CEP131Q9UPN4 1083 aa6.44□□□□□ -1.38
DDB1-219ENST00000541513 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 ROCK2O75116 1388 aaKnown RBP6.44□□□□□ -1.38
DDB1-219ENST00000541513 METTL12A8MUP2 240 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 FAM227AF5H4B4 570 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 TOR1BO14657 336 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 WIPF1O43516 503 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 PQBP1O60828 265 aaKnown RBP6.43□□□□□ -1.38
DDB1-219ENST00000541513 DGAT1O75907 488 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 GPC1P35052 558 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 HOXD12P35452 270 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 SOX18P35713 384 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 OCRLQ01968 901 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 PTPN11Q06124 597 aaPredicted RBP6.43□□□□□ -1.38
DDB1-219ENST00000541513 TMEM132EQ6IEE7 984 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 SULF2Q8IWU5 870 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 ZNF513Q8N8E2 541 aaPredicted RBP6.43□□□□□ -1.38
DDB1-219ENST00000541513 FAM156AQ8NDB6 213 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 GRIN3AQ8TCU5 1115 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 ATRIPQ8WXE1 791 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 UBXN10Q96LJ8 280 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 HHIPQ96QV1 700 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 MYCBPQ99417 103 aaPredicted RBP6.43□□□□□ -1.38
DDB1-219ENST00000541513 CENPOQ9BU64 300 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 TTLL2Q9BWV7 592 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 GRIP2Q9C0E4 1043 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 TMEM60Q9H2L4 133 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 SMOC1Q9H4F8 434 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 HELLSQ9NRZ9 838 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 MKS1Q9NXB0 559 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 CACNA2D2Q9NY47 1150 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 ABCF2Q9UG63 623 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 SYNPO2Q9UMS6 1093 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 CRYL1Q9Y2S2 319 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 TACC3Q9Y6A5 838 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 ADGRB2O60241 1585 aa6.43□□□□□ -1.38
DDB1-219ENST00000541513 QRICH2Q9H0J4 1663 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 DCCP43146 1447 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 ADGRL3Q9HAR2 1447 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.42□□□□□ -1.38
DDB1-219ENST00000541513 ANKRD18BA2A2Z9 1011 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 NFKBIEO00221 500 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 GFRA2O00451 464 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 WFS1O76024 890 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 PYGLP06737 847 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 ATP4AP20648 1035 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 ARNTP27540 789 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 GALNSP34059 522 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 PPM1AP35813 382 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 GRIA2P42262 883 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 PIK3CAP42336 1068 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 TMEM201Q5SNT2 666 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 LCE2CQ5TA81 110 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 PGM2L1Q6PCE3 622 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 OVCH2Q7RTZ1 564 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 CEP120Q8N960 986 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 CLRN3Q8NCR9 226 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 SLC30A5Q8TAD4 765 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 NXPE3Q969Y0 559 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 RIPOR3Q96MK2 946 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 ACO2Q99798 780 aaKnown RBP6.42□□□□□ -1.38
DDB1-219ENST00000541513 SLC26A6Q9BXS9 759 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 PDGFDQ9GZP0 370 aaPredicted RBP6.42□□□□□ -1.38
DDB1-219ENST00000541513 LMAN2LQ9H0V9 348 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 DISC1Q9NRI5 854 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 TOPORSQ9NS56 1045 aaPredicted RBP6.42□□□□□ -1.38
DDB1-219ENST00000541513 ANKEF1Q9NU02 776 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 LRP2BPQ9P2M1 347 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 REV1Q9UBZ9 1251 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 CDC42BPGQ6DT37 1551 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 TMEM94Q12767 1356 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 EIF3AQ14152 1382 aaKnown RBP6.42□□□□□ -1.38
DDB1-219ENST00000541513 FMN2Q9NZ56 1722 aa6.42□□□□□ -1.38
DDB1-219ENST00000541513 LRRC10BA6NIK2 292 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 MEN1O00255 615 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 ST8SIA5O15466 376 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 MMP20O60882 483 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 GFPT2O94808 682 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 B3GALT4O96024 378 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 NR3C2P08235 984 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 RAC2P15153 192 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 ACPPP15309 386 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 SELPP16109 830 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 MMP14P50281 582 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 PMS1P54277 932 aaKnown RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 ZNF267Q14586 743 aaPredicted RBP6.41□□□□□ -1.38
DDB1-219ENST00000541513 SLC6A19Q695T7 634 aa6.41□□□□□ -1.38
DDB1-219ENST00000541513 BICDL1Q6ZP65 573 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms