RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 ADAMTS17Q8TE56 1095 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 OSBP2Q969R2 916 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 KRTAP3-1Q9BYR8 98 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 WDR26Q9H7D7 661 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 GPR27Q9NS67 375 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 ZNF652Q9Y2D9 606 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 TRAF6Q9Y4K3 522 aa6.17□□□□□ -1.42
PRKDC-210ENST00000541488 TRAV20A0A0B4J274 112 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 C1QTNF3-AMACRE9PGA6 284 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 LTFP02788 710 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 ATP2B1P20020 1258 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 GDF5P43026 501 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 IFRD2Q12894 506 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-210ENST00000541488 CHRNA2Q15822 529 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 ST13P5Q8NFI4 369 aaPredicted RBP6.16□□□□□ -1.42
PRKDC-210ENST00000541488 TOE1Q96GM8 510 aaKnown RBP6.16□□□□□ -1.42
PRKDC-210ENST00000541488 SGSM3Q96HU1 749 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 CDIP1Q9H305 208 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 DTLQ9NZJ0 730 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 CROTQ9UKG9 612 aa6.16□□□□□ -1.42
PRKDC-210ENST00000541488 NOBOXO60393 691 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 TADA3O75528 432 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 GRK2P25098 689 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 GRK3P35626 688 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 ADAM9Q13443 819 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 RGL3Q3MIN7 710 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 MTERF2Q49AM1 385 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 PRAMEF18Q5VWM3 479 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 TEPPQ6URK8 271 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 ZFPM1Q8IX07 1006 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 LRRC47Q8N1G4 583 aaKnown RBP6.15□□□□□ -1.42
PRKDC-210ENST00000541488 SPATA9Q9BWV2 254 aa6.15□□□□□ -1.42
PRKDC-210ENST00000541488 ASXL2Q76L83 1435 aa6.15□□□□□ -1.43
PRKDC-210ENST00000541488 KRIT1O00522 736 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 PDPK1O15530 556 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 LRG1P02750 347 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 FGFR1P11362 822 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 GNAT1P11488 350 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 RPL13P26373 211 aaKnown RBP6.14□□□□□ -1.43
PRKDC-210ENST00000541488 EMC4Q5J8M3 183 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 LBX2Q6XYB7 198 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 DCAF4Q8WV16 495 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 CDC6Q99741 560 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 WASF3Q9UPY6 502 aa6.14□□□□□ -1.43
PRKDC-210ENST00000541488 NKRFO15226 690 aaKnown RBP eCLIP6.13□□□□□ -1.43
PRKDC-210ENST00000541488 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
PRKDC-210ENST00000541488 SOD2P04179 222 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 TACR2P21452 398 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 RBM10P98175 930 aaKnown RBP6.13□□□□□ -1.43
PRKDC-210ENST00000541488 SSRP1Q08945 709 aaKnown RBP6.13□□□□□ -1.43
PRKDC-210ENST00000541488 FOXB2Q5VYV0 432 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 CPZQ66K79 652 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 Q8N1X5 172 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 TTLL6Q8N841 843 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 CLEC4DQ8WXI8 215 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 LNPKQ9C0E8 428 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 SMOC1Q9H4F8 434 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 IPPKQ9H8X2 491 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 SLC6A20Q9NP91 592 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
PRKDC-210ENST00000541488 MAFKO60675 156 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 TGM1P22735 817 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 KIZQ2M2Z5 673 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 FAM209AQ5JX71 171 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 OTOP3Q7RTS5 596 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 IFNL3Q8IZI9 196 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 TXNDC5Q8NBS9 432 aaKnown RBP6.12□□□□□ -1.43
PRKDC-210ENST00000541488 MSRB2Q9Y3D2 182 aa6.12□□□□□ -1.43
PRKDC-210ENST00000541488 CYR61O00622 381 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 CYP1A1P04798 512 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-210ENST00000541488 ITGB3P05106 788 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 ZNF20P17024 532 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 MLLT6P55198 1093 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-210ENST00000541488 GPR85P60893 370 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 TUSC3Q13454 348 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 PRR31Q5SQ13 230 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 STYK1Q6J9G0 422 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 RSPO2Q6UXX9 243 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-210ENST00000541488 CLIC6Q96NY7 704 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 CD244Q9BZW8 370 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 PCDH18Q9HCL0 1135 aa6.11□□□□□ -1.43
PRKDC-210ENST00000541488 NGRNQ9NPE2 291 aaKnown RBP6.11□□□□□ -1.43
PRKDC-210ENST00000541488 KDM2BQ8NHM5 1336 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 TRBV23-1A0A0A0MS06 115 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 ADCY3O60266 1144 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 FAM153BP0C7A2 387 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 IL13P35225 146 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 ACVRL1P37023 503 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 RASGRF1Q13972 1273 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 TRMT10BQ6PF06 316 aaKnown RBP6.1□□□□□ -1.43
PRKDC-210ENST00000541488 MTDHQ86UE4 582 aaKnown RBP6.1□□□□□ -1.43
PRKDC-210ENST00000541488 PMFBP1Q8TBY8 1022 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 PHOSPHO1Q8TCT1 267 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 L2HGDHQ9H9P8 463 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 TELO2Q9Y4R8 837 aa6.1□□□□□ -1.43
PRKDC-210ENST00000541488 FAM221BA6H8Z2 402 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 MROH6A6NGR9 719 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 SRGAP2CP0DJJ0 459 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 GLRBP48167 497 aa6.09□□□□□ -1.43
PRKDC-210ENST00000541488 SPIRE1Q08AE8 756 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms