RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 NFATC2IPQ8NCF5 419 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 OLFM3Q96PB7 478 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 ACEP12821 1306 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 PJA2O43164 708 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 ATP8B1O43520 1251 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 PRPSAP2O60256 369 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 KRT75O95678 551 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 HIPK4Q8NE63 616 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 TGFBRAP1Q8WUH2 860 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
HMGA2-210ENST00000541363 RAPGEF3O95398 923 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 EIF3BP55884 814 aaKnown RBP16.53■□□□□ 0.24
HMGA2-210ENST00000541363 EFTUD2Q15029 972 aaKnown RBP eCLIP16.53■□□□□ 0.246e-8■□□□□ 10.7
HMGA2-210ENST00000541363 TNNI3KQ59H18 835 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 LRRC4Q9HBW1 653 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 FPGT-TNNI3KV9GXZ4 949 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 CENPUQ71F23 418 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 PYROXD1Q8WU10 500 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 SH3GL3Q99963 347 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 FAM96AQ9H5X1 160 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 CHGBP05060 677 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 DONSONQ9NYP3 566 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 PTPN23Q9H3S7 1636 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 PGRMC1O00264 195 aaKnown RBP16.53■□□□□ 0.24
HMGA2-210ENST00000541363 ARIH2O95376 493 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 BRD1O95696 1058 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 NR5A1Q13285 461 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 RNF219Q5W0B1 726 aaPredicted RBP16.53■□□□□ 0.24
HMGA2-210ENST00000541363 ADALQ6DHV7 355 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 NIM1KQ8IY84 436 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 MOSPD1Q9UJG1 213 aa16.53■□□□□ 0.24
HMGA2-210ENST00000541363 C16orf72Q14CZ0 275 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 MRPS26Q9BYN8 205 aaKnown RBP16.52■□□□□ 0.24
HMGA2-210ENST00000541363 UBXN8O00124 270 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 ADCY2Q08462 1091 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 PARP10Q53GL7 1025 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 WDR75Q8IWA0 830 aaKnown RBP16.52■□□□□ 0.24
HMGA2-210ENST00000541363 KDM4CQ9H3R0 1056 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 INPP5FQ9Y2H2 1132 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 CALN1Q9BXU9 219 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 PRKAG2Q9UGJ0 569 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 MKL2Q9ULH7 1088 aa16.52■□□□□ 0.24
HMGA2-210ENST00000541363 DNAJC6O75061 913 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 KRT72Q14CN4 511 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 DNAJC24Q6P3W2 148 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 BLIDQ8IZY5 108 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 EAPPQ56P03 285 aaPredicted RBP16.52■□□□□ 0.23
HMGA2-210ENST00000541363 GALNT17Q6IS24 598 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 TTC30AQ86WT1 665 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 MYL10Q9BUA6 226 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 ARPP21Q9UBL0 812 aaPredicted RBP16.52■□□□□ 0.23
HMGA2-210ENST00000541363 MAP3K5Q99683 1374 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 PDE8AO60658 829 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 CCDC15Q0P6D6 951 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 ZNF711Q9Y462 761 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 SESN1Q9Y6P5 492 aa16.52■□□□□ 0.23
HMGA2-210ENST00000541363 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 MEIS1O00470 390 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 OR52Z1P0C646 297 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 KRT14P02533 472 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 UBE3AQ05086 875 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 KRT39Q6A163 491 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 PSMC2P35998 433 aaKnown RBP16.51■□□□□ 0.23
HMGA2-210ENST00000541363 C1orf146Q5VVC0 180 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 ANO5Q75V66 913 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 SH3GL2Q99962 352 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 ZMYND12Q9H0C1 365 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 AOX1Q06278 1338 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 MYO1EQ12965 1108 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 SPARCL1Q14515 664 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 C8orf34Q49A92 452 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 PPP6R3Q5H9R7 873 aaPredicted RBP16.51■□□□□ 0.23
HMGA2-210ENST00000541363 TESK2Q96S53 571 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 DNAJC17Q9NVM6 304 aaKnown RBP16.51■□□□□ 0.23
HMGA2-210ENST00000541363 GEMIN8Q9NWZ8 242 aaKnown RBP16.51■□□□□ 0.23
HMGA2-210ENST00000541363 DEAF1O75398 565 aaPredicted RBP16.51■□□□□ 0.23
HMGA2-210ENST00000541363 ZNF18P17022 549 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 RANBP1P43487 201 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 HDDC2Q7Z4H3 204 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 FMO2Q99518 471 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 FRMPD2Q68DX3 1309 aaPredicted RBP16.51■□□□□ 0.23
HMGA2-210ENST00000541363 DMC1Q14565 340 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
HMGA2-210ENST00000541363 PRDM1O75626 825 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 ZSCAN20P17040 1043 aaPredicted RBP16.5■□□□□ 0.23
HMGA2-210ENST00000541363 MXD4Q14582 209 aaPredicted RBP16.5■□□□□ 0.23
HMGA2-210ENST00000541363 SIX6OS1Q8N1H7 587 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 KPNA7A9QM74 516 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 AFPP02771 609 aaKnown RBP16.5■□□□□ 0.23
HMGA2-210ENST00000541363 C2orf54Q08AI8 447 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 OSBPL10Q9BXB5 764 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 SLC39A2Q9NP94 309 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 GTSE1Q9NYZ3 720 aa16.5■□□□□ 0.23
HMGA2-210ENST00000541363 GRIN2BQ13224 1484 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms