RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 ASPRV1Q53RT3 343 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 TTBK2Q6IQ55 1244 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 ARHGAP27Q6ZUM4 889 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 AMOTL1Q8IY63 956 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 SNX29Q8TEQ0 813 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 CRYGNQ8WXF5 182 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 CAVIN3Q969G5 261 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 CCDC47Q96A33 483 aaKnown RBP10.56□□□□□ -0.72
CNOT4-212ENST00000541284 MS4A14Q96JA4 679 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 MMRN2Q9H8L6 949 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 HYOU1Q9Y4L1 999 aa10.56□□□□□ -0.72
CNOT4-212ENST00000541284 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 TACC1O75410 805 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 BBOX1O75936 387 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SERPINB2P05120 415 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SLURP2P0DP57 97 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 TTMPQ5BVD1 217 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 ARSHQ5FYA8 562 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SOGA3Q5TF21 947 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 ADGRF4Q8IZF3 695 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 ANKRD13CQ8N6S4 541 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 CNBD1Q8NA66 436 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 PIK3R5Q8WYR1 880 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SYN2Q92777 582 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 PCMTD1Q96MG8 357 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 PLEKHA4Q9H4M7 779 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 ZNF287Q9HBT7 754 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 NENFQ9UMX5 172 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 ARID2Q68CP9 1835 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 UFL1O94874 794 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SHMT1P34896 483 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 HOXD13P35453 343 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SPA17Q15506 151 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 MBOAT7Q96N66 472 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 INPP4AQ96PE3 977 aaPredicted RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 CAMKK2Q96RR4 588 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 EHD4Q9H223 541 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 NPM3O75607 178 aaKnown RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 IVLP07476 585 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 MYBP10242 640 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 EPB41P11171 864 aaKnown RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 TCP1P17987 556 aaKnown RBP10.55□□□□□ -0.72
CNOT4-212ENST00000541284 RASSF7Q02833 373 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 SCFD1Q8WVM8 642 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 PSMB7Q99436 277 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 GDF3Q9NR23 364 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 CEP72Q9P209 647 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
CNOT4-212ENST00000541284 PNMA6FA0A0J9YX94 578 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 NPHP3-ACAD11A0A0J9YXS1 232 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 GLI1P08151 1106 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 ATP2B4P23634 1241 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 HOXA7P31268 230 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 MAGEA1P43355 309 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 HSP90B2PQ58FF3 399 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 MFSD14BQ5SR56 506 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 CAGE1Q8TC20 777 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 ACBD3Q9H3P7 528 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 KANSL2Q9H9L4 492 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 KCNMB3Q9NPA1 279 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 PCDHGC5Q9Y5F6 944 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 ZSCAN5CA6NGD5 496 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 USO1O60763 962 aaKnown RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 FAM83BQ5T0W9 1011 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 RNF10Q8N5U6 811 aaKnown RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 PACSIN1Q9BY11 444 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 STIM2Q9P246 746 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 E9PMD0 336 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 FAM153BP0C7A2 387 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 NAB2Q15742 525 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 FAM153CQ494X1 144 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 DPP8Q6V1X1 898 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 LEKR1Q6ZMV7 388 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 SND1Q7KZF4 910 aaKnown RBP eCLIP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 MYOCDQ8IZQ8 938 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 ARL8AQ96BM9 186 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 ZFP91Q96JP5 570 aaPredicted RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 GPCPD1Q9NPB8 672 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 DDX25Q9UHL0 483 aaKnown RBP10.54□□□□□ -0.72
CNOT4-212ENST00000541284 FAM153AQ9UHL3 310 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 TMEM59LQ9UK28 342 aa10.54□□□□□ -0.72
CNOT4-212ENST00000541284 A0A087X0T9 212 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 BUB1O43683 1085 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 IPO7O95373 1038 aaKnown RBP10.53□□□□□ -0.72
CNOT4-212ENST00000541284 FAM228BP0C875 321 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 PLCG2P16885 1265 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 CYP11B2P19099 503 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 KLRC1P26715 233 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 CASP5P51878 434 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 SLC12A3P55017 1021 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 EIF6P56537 245 aaKnown RBP10.53□□□□□ -0.72
CNOT4-212ENST00000541284 MEI1Q5TIA1 1274 aa10.53□□□□□ -0.72
CNOT4-212ENST00000541284 DNAJC18Q9H819 358 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms