RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ZNF605Q86T29 641 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 FERD3LQ96RJ6 166 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 GCM1Q9NP62 436 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 ERVK13-1Q9NX77 482 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 ASAP1Q9ULH1 1129 aa7.55□□□□□ -1.2
SUDS3-202ENST00000541280 PNPLA7Q6ZV29 1317 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 OR14I1A6ND48 311 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 RNMTO43148 476 aaKnown RBP7.54□□□□□ -1.2
SUDS3-202ENST00000541280 HTATSF1O43719 755 aaKnown RBP7.54□□□□□ -1.2
SUDS3-202ENST00000541280 FKTNO75072 461 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 GSNP06396 782 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 VAV1P15498 845 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 PDE6BP35913 854 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 MTHFSDQ2M296 383 aaKnown RBP7.54□□□□□ -1.2
SUDS3-202ENST00000541280 METTL16Q86W50 562 aaKnown RBP7.54□□□□□ -1.2
SUDS3-202ENST00000541280 PPFIBP1Q86W92 1011 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 SPATA32Q96LK8 384 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 SRRTQ9BXP5 876 aaKnown RBP7.54□□□□□ -1.2
SUDS3-202ENST00000541280 SLC52A2Q9HAB3 445 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 FBXL21Q9UKT6 434 aa7.54□□□□□ -1.2
SUDS3-202ENST00000541280 EP400Q96L91 3159 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 U2AF1L5P0DN76 240 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 ZSCAN22P10073 491 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 GALK1P51570 392 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 RTP1P59025 263 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 ERVFRD-1P60508 538 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 U2AF1Q01081 240 aaKnown RBP eCLIP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 CNGB1Q14028 1251 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 HSF5Q4G112 596 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 GALNT18Q6P9A2 607 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 CRTC3Q6UUV7 619 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 SLCO6A1Q86UG4 719 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 COL23A1Q86Y22 540 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 CCDC144CPQ8IYA2 1237 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 ZNF654Q8IZM8 581 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 NLGN1Q8N2Q7 840 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 RTF1Q92541 710 aaKnown RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 PLCD4Q9BRC7 762 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 SYT17Q9BSW7 474 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 TEX13AQ9BXU3 409 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 KRTAP4-7Q9BYR0 210 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 PDGFDQ9GZP0 370 aaPredicted RBP7.53□□□□□ -1.2
SUDS3-202ENST00000541280 PPT2Q9UMR5 302 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 MYOM1P52179 1685 aa7.53□□□□□ -1.2
SUDS3-202ENST00000541280 A0A1W2PQ45 241 aaPredicted RBP7.52□□□□□ -1.21
SUDS3-202ENST00000541280 A0A1W2PQY0 241 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 WTIPA6NIX2 430 aaPredicted RBP7.52□□□□□ -1.21
SUDS3-202ENST00000541280 RPS6KA4O75676 772 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 SOX9P48436 509 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 YBX1P67809 324 aaKnown RBP7.52□□□□□ -1.21
SUDS3-202ENST00000541280 TEFQ10587 303 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 RTP2Q5QGT7 225 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 ADGRF1Q5T601 910 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 CIAPIN1Q6FI81 312 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 UNC5AQ6ZN44 842 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 LSRQ86X29 649 aaPredicted RBP7.52□□□□□ -1.21
SUDS3-202ENST00000541280 TTC5Q8N0Z6 440 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 RASGRP4Q8TDF6 673 aa7.52□□□□□ -1.21
SUDS3-202ENST00000541280 GPR55Q9Y2T6 319 aaPredicted RBP7.52□□□□□ -1.21
SUDS3-202ENST00000541280 TNS1Q9HBL0 1735 aaKnown RBP7.52□□□□□ -1.21
SUDS3-202ENST00000541280 LTN1O94822 1766 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 MAP3K5Q99683 1374 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 PRKAR2BP31323 418 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 DDX10Q13206 875 aaKnown RBP7.51□□□□□ -1.21
SUDS3-202ENST00000541280 ZYXQ15942 572 aaKnown RBP7.51□□□□□ -1.21
SUDS3-202ENST00000541280 RAPGEFL1Q9UHV5 662 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 ACSL6Q9UKU0 697 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 ZNF214Q9UL59 606 aaPredicted RBP7.51□□□□□ -1.21
SUDS3-202ENST00000541280 CD2APQ9Y5K6 639 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 NHSQ6T4R5 1651 aa7.51□□□□□ -1.21
SUDS3-202ENST00000541280 MEIS1O00470 390 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 STARD3NLO95772 234 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 RFC4P35249 363 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 PAK2Q13177 524 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 LAPTM5Q13571 262 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 ITPK1Q13572 414 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 AXDND1Q5T1B0 1012 aaPredicted RBP7.5□□□□□ -1.21
SUDS3-202ENST00000541280 SIRT2Q8IXJ6 389 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 TMEM52Q8NDY8 209 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 IL17REQ8NFR9 667 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 PNISRQ8TF01 805 aaKnown RBP7.5□□□□□ -1.21
SUDS3-202ENST00000541280 DSCC1Q9BVC3 393 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 CDADC1Q9BWV3 514 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 SLC12A9Q9BXP2 914 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 GP6Q9HCN6 339 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 AP5S1Q9NUS5 200 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 MBD1Q9UIS9 605 aaPredicted RBP7.5□□□□□ -1.21
SUDS3-202ENST00000541280 FHOD1Q9Y613 1164 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 TAF6LQ9Y6J9 622 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 RGPD3A6NKT7 1758 aaPredicted RBP7.5□□□□□ -1.21
SUDS3-202ENST00000541280 RGPD4Q7Z3J3 1758 aa7.5□□□□□ -1.21
SUDS3-202ENST00000541280 LRP5O75197 1615 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 FAM86C2PA6NEL3 165 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 ABLIM1O14639 778 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 NUAK1O60285 661 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 ZNF445P59923 1031 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 TDRD10Q5VZ19 366 aaKnown RBP7.49□□□□□ -1.21
SUDS3-202ENST00000541280 DCAF15Q66K64 600 aa7.49□□□□□ -1.21
SUDS3-202ENST00000541280 ZNF790Q6PG37 636 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms