RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
LTBR-209ENST00000541102 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 AIFM3Q96NN9 605 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 KATNAL1Q9BW62 490 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 SLC26A6Q9BXS9 759 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 RIC8AQ9NPQ8 531 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 PKD2L1Q9P0L9 805 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 SZT2Q5T011 3432 aa16.28■□□□□ 0.2
LTBR-209ENST00000541102 LAMA3Q16787 3333 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.27■□□□□ 0.2
LTBR-209ENST00000541102 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.27■□□□□ 0.2
LTBR-209ENST00000541102 JAK2O60674 1132 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 SMAD3P84022 425 aaKnown RBP16.27■□□□□ 0.2
LTBR-209ENST00000541102 PPP1R18Q6NYC8 613 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 OTOP2Q7RTS6 562 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 DEFB128Q7Z7B8 93 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 EHMT1Q9H9B1 1298 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 BARHL2Q9NY43 387 aa16.27■□□□□ 0.2
LTBR-209ENST00000541102 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 hCG_1984214I3L0E3 225 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 HAS3O00219 553 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 PRPF3O43395 683 aaKnown RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 F2P00734 622 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 HOXD8P13378 290 aaPredicted RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 FDPSP14324 419 aaKnown RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 ITGB5P18084 799 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 BFSP2Q13515 415 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 UTP14CQ5TAP6 766 aaKnown RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 ZNF697Q5TEC3 545 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 FAM109BQ6ICB4 259 aaPredicted RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 METTL7BQ6UX53 244 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 ZNF713Q8N859 430 aaPredicted RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 NSUN7Q8NE18 718 aaKnown RBP16.26■□□□□ 0.19
LTBR-209ENST00000541102 C16orf70Q9BSU1 422 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 TMEM260Q9NX78 707 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 TELO2Q9Y4R8 837 aa16.26■□□□□ 0.19
LTBR-209ENST00000541102 CPLX1O14810 134 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 ST18O60284 1047 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 ATP9AO75110 1047 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 SCG2P13521 617 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 ZNF200P98182 395 aaPredicted RBP16.25■□□□□ 0.19
LTBR-209ENST00000541102 PFKFB3Q16875 520 aaPredicted RBP16.25■□□□□ 0.19
LTBR-209ENST00000541102 JAKMIP3Q5VZ66 844 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 HERVK_113Q902F9 699 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 GPRASP2Q96D09 838 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 TMX3Q96JJ7 454 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 GPR20Q99678 358 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 SENP7Q9BQF6 1050 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 RNF26Q9BY78 433 aaPredicted RBP16.25■□□□□ 0.19
LTBR-209ENST00000541102 ANO3Q9BYT9 981 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 CXXC1Q9P0U4 656 aaPredicted RBP16.25■□□□□ 0.19
LTBR-209ENST00000541102 GTF2IRD1Q9UHL9 959 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 UBIAD1Q9Y5Z9 338 aa16.25■□□□□ 0.19
LTBR-209ENST00000541102 H3BRB1 525 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 FOSP01100 380 aaPredicted RBP16.24■□□□□ 0.19
LTBR-209ENST00000541102 LGALS2P05162 132 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 SSRP1Q08945 709 aaKnown RBP16.24■□□□□ 0.19
LTBR-209ENST00000541102 MTMR1Q13613 665 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 GIMAP8Q8ND71 665 aaPredicted RBP16.24■□□□□ 0.19
LTBR-209ENST00000541102 CDHR1Q96JP9 859 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
LTBR-209ENST00000541102 GLT8D2Q9H1C3 349 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 MTIF3Q9H2K0 278 aaKnown RBP16.24■□□□□ 0.19
LTBR-209ENST00000541102 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
LTBR-209ENST00000541102 JADE2Q9NQC1 790 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 GJB4Q9NTQ9 266 aa16.24■□□□□ 0.19
LTBR-209ENST00000541102 ZBBXA8MT70 800 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 KCNA2P16389 499 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 ZNF76P36508 570 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 CYP2W1Q8TAV3 490 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
LTBR-209ENST00000541102 VWCEQ96DN2 955 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 ZSCAN31Q96LW9 406 aaPredicted RBP16.23■□□□□ 0.19
LTBR-209ENST00000541102 MXRA8Q9BRK3 442 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 C6orf50Q9HD87 102 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 VPS54Q9P1Q0 977 aa16.23■□□□□ 0.19
LTBR-209ENST00000541102 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 C17orf102A2RUQ5 167 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 RFC2P35250 354 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 PBX2P40425 430 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 HIC1Q14526 733 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 TEX2Q8IWB9 1127 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 CAGE1Q8TC20 777 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 AFAP1L1Q8TED9 768 aa16.22■□□□□ 0.19
LTBR-209ENST00000541102 CCDC12Q8WUD4 166 aaPredicted RBP16.22■□□□□ 0.19
LTBR-209ENST00000541102 TTYH1Q9H313 450 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms