RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 BADQ92934 168 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 PGBD1Q96JS3 809 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 MXRA8Q9BRK3 442 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 C16orf70Q9BSU1 422 aa14.97□□□□□ -0.01
LTBR-208ENST00000541005 UBE2OQ9C0C9 1292 aaKnown RBP14.97□□□□□ -0.01
LTBR-208ENST00000541005 MEIS1O00470 390 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 LARGE1O95461 756 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 SUPT20HL2P0C7V6 817 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 NPY5RQ15761 445 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 GALNT17Q6IS24 598 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 CYFIP1Q7L576 1253 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 TDHQ8IZJ6 230 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 GPR20Q99678 358 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 C22orf23Q9BZE7 217 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 BCAS3Q9H6U6 928 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 KCNH7Q9NS40 1196 aa14.96□□□□□ -0.01
LTBR-208ENST00000541005 TRMT13Q9NUP7 481 aaKnown RBP14.96□□□□□ -0.01
LTBR-208ENST00000541005 LAMA3Q16787 3333 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 NFASCO94856 1347 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 GBF1Q92538 1859 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 M0R2N6 131 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 NOP56O00567 594 aaKnown RBP14.95□□□□□ -0.02
LTBR-208ENST00000541005 ATP9AO75110 1047 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 LGALS2P05162 132 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 PSEN2P49810 448 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 MFSD10Q14728 455 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 MFSD5Q6N075 450 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 IL27Q8NEV9 243 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 CYP2W1Q8TAV3 490 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 AIFM3Q96NN9 605 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 NOC4LQ9BVI4 516 aaKnown RBP14.95□□□□□ -0.02
LTBR-208ENST00000541005 PCDHA4Q9UN74 947 aa14.95□□□□□ -0.02
LTBR-208ENST00000541005 IGLV3-22A0A075B6J6 115 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 FAM86B1E9PN63 330 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 SORBS3O60504 671 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 FAM86B2P0C5J1 330 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 HOXC8P31273 242 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 CIITAP33076 1130 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.02
LTBR-208ENST00000541005 NLRP5P59047 1200 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 FPGSQ05932 587 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 ST3GAL1Q11201 340 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 KIAA0753Q2KHM9 967 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 RASGRP4Q8TDF6 673 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 CTAGE1Q96RT6 745 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 HIPK3Q9H422 1215 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 AGO4Q9HCK5 861 aaKnown RBP14.94□□□□□ -0.02
LTBR-208ENST00000541005 GTF2IRD1Q9UHL9 959 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 LOXHD1Q8IVV2 1947 aa14.94□□□□□ -0.02
LTBR-208ENST00000541005 EVPLQ92817 2033 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 SETQ01105 290 aaPredicted RBP14.93□□□□□ -0.02
LTBR-208ENST00000541005 LRIT3Q3SXY7 679 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 GDF6Q6KF10 455 aaPredicted RBP14.93□□□□□ -0.02
LTBR-208ENST00000541005 BLIDQ8IZY5 108 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 NECAB1Q8N987 351 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 NSUN7Q8NE18 718 aaKnown RBP14.93□□□□□ -0.02
LTBR-208ENST00000541005 WASF1Q92558 559 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 PHF20Q9BVI0 1012 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 JPH1Q9HDC5 661 aaPredicted RBP14.93□□□□□ -0.02
LTBR-208ENST00000541005 ORC3Q9UBD5 711 aaPredicted RBP14.93□□□□□ -0.02
LTBR-208ENST00000541005 LIMCH1Q9UPQ0 1083 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 TELO2Q9Y4R8 837 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 SIP14410 1827 aa14.93□□□□□ -0.02
LTBR-208ENST00000541005 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 H3BRB1 525 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 PITPNM1O00562 1244 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 EDIL3O43854 480 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 ARP10275 920 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 FDPSP14324 419 aaKnown RBP14.92□□□□□ -0.02
LTBR-208ENST00000541005 XBP1P17861 261 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 ZNF76P36508 570 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 USP11P51784 963 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 RBL2Q08999 1139 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 ITGB3BPQ13352 177 aaPredicted RBP14.92□□□□□ -0.02
LTBR-208ENST00000541005 PPIGQ13427 754 aaKnown RBP eCLIP14.92□□□□□ -0.02
LTBR-208ENST00000541005 RABEP1Q15276 862 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 PTGISQ16647 500 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 TMEM199Q8N511 208 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 C7orf31Q8N865 590 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 LENG9Q96B70 501 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 SDF4Q9BRK5 362 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 PPP1R12CQ9BZL4 782 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 TUT1Q9H6E5 874 aaKnown RBP14.92□□□□□ -0.02
LTBR-208ENST00000541005 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
LTBR-208ENST00000541005 HDAC6Q9UBN7 1215 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
LTBR-208ENST00000541005 MICAL3Q7RTP6 2002 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 UMODL1Q5DID0 1318 aa14.92□□□□□ -0.02
LTBR-208ENST00000541005 MYO9BQ13459 2157 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 GSTTP1A0A1W2PQM5 241 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 LGR5O75473 907 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 CYP2C9P11712 490 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 CYP2C18P33260 490 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 TCF7P36402 384 aaPredicted RBP14.91□□□□□ -0.02
LTBR-208ENST00000541005 EPHB4P54760 987 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 PLA2G4DQ86XP0 818 aa14.91□□□□□ -0.02
LTBR-208ENST00000541005 TRIM50Q86XT4 487 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms