RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 NCAPHQ15003 741 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 CALCRLQ16602 461 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 ZNF792Q3KQV3 632 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 WDR78Q5VTH9 848 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 PLEKHH3Q7Z736 793 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 IGSF22Q8N9C0 903 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 CYP2W1Q8TAV3 490 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 DOCK5Q9H7D0 1870 aa14.03□□□□□ -0.16
SMAD3-204ENST00000540846 SLC15A5A6NIM6 579 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 PP2D1A8MPX8 630 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 SMTNL1A8MU46 457 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 CDC25BP30305 580 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 FXR2P51116 673 aaKnown RBP eCLIP14.02□□□□□ -0.16
SMAD3-204ENST00000540846 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.16
SMAD3-204ENST00000540846 KARSQ15046 597 aaKnown RBP14.02□□□□□ -0.16
SMAD3-204ENST00000540846 ISM2Q6H9L7 571 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 VSIG10LQ86VR7 867 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 MLKLQ8NB16 471 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 MORC4Q8TE76 937 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 NSUN6Q8TEA1 469 aaKnown RBP14.02□□□□□ -0.16
SMAD3-204ENST00000540846 GSDMAQ96QA5 445 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 TRIM5Q9C035 493 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 ARHGAP39Q9C0H5 1083 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 EHMT1Q9H9B1 1298 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 SAGE1Q9NXZ1 904 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 DACH1Q9UI36 760 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 UBIAD1Q9Y5Z9 338 aa14.02□□□□□ -0.16
SMAD3-204ENST00000540846 HTTP42858 3142 aa14.02□□□□□ -0.17
SMAD3-204ENST00000540846 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-204ENST00000540846 RGS20O76081 388 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 NR3C2P08235 984 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 ITGB5P18084 799 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 UBA7P41226 1012 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 STAT6P42226 847 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 AFMP43652 599 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 TPM4P67936 248 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 MYL5Q02045 173 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 Q4G0T1 1027 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 MRFAP1L1Q96HT8 127 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 ZFP91Q96JP5 570 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-204ENST00000540846 TRIM47Q96LD4 638 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 MAGEF1Q9HAY2 307 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 KCNMB3Q9NPA1 279 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 GJD2Q9UKL4 321 aa14.01□□□□□ -0.17
SMAD3-204ENST00000540846 MEIS1O00470 390 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 IGHA2P01877 340 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 HOXC6P09630 235 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 CDC25AP30304 524 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 CEP55Q53EZ4 464 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 NAALADL2Q58DX5 795 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 CT47A1Q5JQC4 288 aaPredicted RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 XRRA1Q6P2D8 792 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 ETNPPLQ8TBG4 499 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 HAS1Q92839 578 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 INPP4AQ96PE3 977 aaPredicted RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 IWS1Q96ST2 819 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 MTRQ99707 1265 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 CUEDC2Q9H467 287 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 RRAGDQ9NQL2 400 aaPredicted RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 ADD3Q9UEY8 706 aaKnown RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 DDX25Q9UHL0 483 aaKnown RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 WDR81Q562E7 1941 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 LOC102724159A0A0B4J2E5 919 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 PWP2Q15269 919 aaKnown RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 TMEM266Q2M3C6 531 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 RRAGBQ5VZM2 374 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 NIPA1Q7RTP0 329 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 ZNF467Q7Z7K2 595 aaPredicted RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 CABP7Q86V35 215 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 NPLOC4Q8TAT6 608 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 MXRA8Q9BRK3 442 aa14□□□□□ -0.17
SMAD3-204ENST00000540846 MMTAG2Q9BU76 263 aaKnown RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 DIS3Q9Y2L1 958 aaKnown RBP14□□□□□ -0.17
SMAD3-204ENST00000540846 GOLGA6L6A8MZA4 724 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 GPR25O00155 361 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 MYL1P05976 194 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 TPM3P06753 285 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 ERCC5P28715 1186 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-204ENST00000540846 CCND2P30279 289 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 TECP42680 631 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 SP3Q02447 781 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 MAP2K5Q13163 448 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 SEMA3FQ13275 785 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 PRR16Q569H4 304 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 MAMDC4Q6UXC1 1216 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 MAML3Q96JK9 1138 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 RAB34Q9BZG1 259 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 HSD3B7Q9H2F3 369 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 KBTBD4Q9NVX7 518 aa13.99□□□□□ -0.17
SMAD3-204ENST00000540846 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.99□□□□□ -0.17
SMAD3-204ENST00000540846 TNPO2O14787 897 aaKnown RBP13.98□□□□□ -0.17
SMAD3-204ENST00000540846 MSH4O15457 936 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 ECM2O94769 699 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-204ENST00000540846 ARP10275 920 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 MYCLP12524 364 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-204ENST00000540846 PLCG1P19174 1290 aa13.98□□□□□ -0.17
SMAD3-204ENST00000540846 CASP1P29466 404 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms