RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 NAP1L2Q9ULW6 460 aaPredicted RBP11.9□□□□□ -0.5
CDCA3-208ENST00000540683 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
CDCA3-208ENST00000540683 KLF18A0A0U1RQI7 1052 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 ABHD14A-ACY1A0A1B0GW23 586 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 C17orf102A2RUQ5 167 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 HAS3O00219 553 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 MEIS2O14770 477 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 GNA11P29992 359 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 HSPA4P34932 840 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 CPLX2Q6PUV4 134 aaKnown RBP11.89□□□□□ -0.51
CDCA3-208ENST00000540683 USP17L6PQ6QN14 398 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 RSPH3Q86UC2 560 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-208ENST00000540683 KAT2BQ92831 832 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 KCNB2Q92953 911 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 FAM161BQ96MY7 647 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 ALG1Q9BT22 464 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 PBX4Q9BYU1 374 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 HDAC6Q9UBN7 1215 aa11.89□□□□□ -0.51
CDCA3-208ENST00000540683 RGS20O76081 388 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 LGALS2P05162 132 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 CENPBP07199 599 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-208ENST00000540683 ZNF286BP0CG31 522 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 MRPS9P82933 396 aaKnown RBP11.88□□□□□ -0.51
CDCA3-208ENST00000540683 IKBKEQ14164 716 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 HSDL1Q3SXM5 330 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 GDF6Q6KF10 455 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-208ENST00000540683 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 CNKSR3Q6P9H4 555 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 CYFIP1Q7L576 1253 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 DEFB128Q7Z7B8 93 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 TRIM22Q8IYM9 498 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 CCDC82Q8N4S0 544 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 CCDC148Q8NFR7 591 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 MAFAQ8NHW3 353 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-208ENST00000540683 SEPT1Q8WYJ6 367 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 ATP6V0A1Q93050 837 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 SCLYQ96I15 445 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 JAKMIP1Q96N16 626 aaKnown RBP11.88□□□□□ -0.51
CDCA3-208ENST00000540683 GUCD1Q96NT3 240 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 SDF4Q9BRK5 362 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 LRRC2Q9BYS8 371 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 SMARCAD1Q9H4L7 1026 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 AZI2Q9H6S1 392 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 C6orf50Q9HD87 102 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 BARHL2Q9NY43 387 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 ERAP1Q9NZ08 941 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 PCDHA6Q9UN73 950 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 PCDHA8Q9Y5H6 950 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 TANC1Q9C0D5 1861 aa11.88□□□□□ -0.51
CDCA3-208ENST00000540683 NRCAMQ92823 1304 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 CKBP12277 381 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 RXRAP19793 462 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 PTGS1P23219 599 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 ZNF76P36508 570 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 SLC26A2P50443 739 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 SLC35G1Q2M3R5 365 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 PPP2R2DQ66LE6 453 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 NIPA1Q7RTP0 329 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 SERINC5Q86VE9 423 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 APBB2Q92870 758 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 GPR20Q99678 358 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 C16orf70Q9BSU1 422 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 ZBED2Q9BTP6 218 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 C22orf23Q9BZE7 217 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 JADE2Q9NQC1 790 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 RTEL1Q9NZ71 1219 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
CDCA3-208ENST00000540683 COL6A3P12111 3177 aa11.87□□□□□ -0.51
CDCA3-208ENST00000540683 UMODL1Q5DID0 1318 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 CNTNAP5Q8WYK1 1306 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 KAT6AQ92794 2004 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 ESYT2A0FGR8 921 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 SMCO2A6NFE2 343 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 RRN3P2A6NIE6 340 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 RSPH10B2B2RC85 870 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 RSPH10BP0C881 870 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 SCG2P13521 617 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 SETQ01105 290 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 SP2Q02086 613 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 PFKFB3Q16875 520 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 Q6ZUG5 572 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 SYMPKQ92797 1274 aaKnown RBP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 GLG1Q92896 1179 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 TTYH1Q9H313 450 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 JPH1Q9HDC5 661 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-208ENST00000540683 PPP4R2Q9NY27 417 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 UBIAD1Q9Y5Z9 338 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 NID2Q14112 1375 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 NFASCO94856 1347 aa11.86□□□□□ -0.51
CDCA3-208ENST00000540683 M0QZ92 97 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 CPLX1O14810 134 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 CDKL5O76039 1030 aa11.85□□□□□ -0.51
CDCA3-208ENST00000540683 CXCL10P02778 98 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms