RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 C16orf70Q9BSU1 422 aa9.38□□□□□ -0.91
LRP6-204ENST00000540415 RC3H2Q9HBD1 1191 aaKnown RBP9.38□□□□□ -0.91
LRP6-204ENST00000540415 BARX2Q9UMQ3 279 aaPredicted RBP9.38□□□□□ -0.91
LRP6-204ENST00000540415 TELO2Q9Y4R8 837 aa9.38□□□□□ -0.91
LRP6-204ENST00000540415 ZFHX4Q86UP3 3567 aa9.38□□□□□ -0.91
LRP6-204ENST00000540415 B4DLN1 442 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 NCK2O43639 380 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 GGPS1O95749 300 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 GLP2RO95838 553 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 NR3C2P08235 984 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 FGRP09769 529 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 HOXC8P31273 242 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 MRPL12P52815 198 aaKnown RBP9.37□□□□□ -0.91
LRP6-204ENST00000540415 CBX2Q14781 532 aaPredicted RBP9.37□□□□□ -0.91
LRP6-204ENST00000540415 CDC37Q16543 378 aaPredicted RBP9.37□□□□□ -0.91
LRP6-204ENST00000540415 ARHGEF16Q5VV41 709 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 MYSM1Q5VVJ2 828 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 RBM23Q86U06 439 aaKnown RBP9.37□□□□□ -0.91
LRP6-204ENST00000540415 IL31RAQ8NI17 732 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 RPGRIP1Q96KN7 1286 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 SPATA33Q96N06 139 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 FSD1Q9BTV5 496 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 C11orf84Q9BUA3 381 aaPredicted RBP9.37□□□□□ -0.91
LRP6-204ENST00000540415 LMAN2LQ9H0V9 348 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 RNPEPQ9H4A4 650 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 SETD4Q9NVD3 440 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 ANAPC4Q9UJX5 808 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 DDX19BQ9UMR2 479 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 USP15Q9Y4E8 981 aaPredicted RBP9.37□□□□□ -0.91
LRP6-204ENST00000540415 ATG2AQ2TAZ0 1938 aa9.37□□□□□ -0.91
LRP6-204ENST00000540415 KMT2EQ8IZD2 1858 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 ADGRA3Q8IWK6 1321 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 MICAL3Q7RTP6 2002 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 OPLAHO14841 1288 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 EIF3JO75822 258 aaKnown RBP9.36□□□□□ -0.91
LRP6-204ENST00000540415 MMP1P03956 469 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 ITGB1P05556 798 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 RB1P06400 928 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 GHRP10912 638 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 MYCLP12524 364 aaPredicted RBP9.36□□□□□ -0.91
LRP6-204ENST00000540415 UBA1P22314 1058 aaKnown RBP9.36□□□□□ -0.91
LRP6-204ENST00000540415 HAND2P61296 217 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 FOXK2Q01167 660 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 SIGLEC14Q08ET2 396 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 CELF3Q5SZQ8 465 aaKnown RBP9.36□□□□□ -0.91
LRP6-204ENST00000540415 C20orf194Q5TEA3 1177 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 TRIM50Q86XT4 487 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 SMRP1Q8NCR6 262 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 VN1R2Q8NFZ6 395 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 CLP1Q92989 425 aaKnown RBP9.36□□□□□ -0.91
LRP6-204ENST00000540415 IWS1Q96ST2 819 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 PRRX2Q99811 253 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 ZKSCAN3Q9BRR0 538 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 PXMP2Q9NR77 195 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 PLAGL2Q9UPG8 496 aa9.36□□□□□ -0.91
LRP6-204ENST00000540415 PTPRZ1P23471 2315 aaPredicted RBP9.36□□□□□ -0.91
LRP6-204ENST00000540415 ABCB11O95342 1321 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 PRR23AA6NEV1 266 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 CCER2I3L3R5 266 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 KDM4AO75164 1064 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 PPFIA4O75335 1185 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 CHRNA1P02708 482 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 LGALS2P05162 132 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 ARP10275 920 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 SP100P23497 879 aaPredicted RBP9.35□□□□□ -0.91
LRP6-204ENST00000540415 NRIP1P48552 1158 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 COASYQ13057 564 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 BTG3Q14201 252 aaPredicted RBP9.35□□□□□ -0.91
LRP6-204ENST00000540415 PKN1Q16512 942 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 QRICH1Q2TAL8 776 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 RUFY4Q6ZNE9 571 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 ADGRF4Q8IZF3 695 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 EFHBQ8N7U6 833 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 SPPL3Q8TCT6 385 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 LINC01599Q8WXQ3 324 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 ZNF689Q96CS4 500 aaPredicted RBP9.35□□□□□ -0.91
LRP6-204ENST00000540415 GPATCH3Q96I76 525 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 TCP11L1Q9NUJ3 509 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 PNMA2Q9UL42 364 aa9.35□□□□□ -0.91
LRP6-204ENST00000540415 MRPL42Q9Y6G3 142 aaKnown RBP9.35□□□□□ -0.91
LRP6-204ENST00000540415 DMXL1Q9Y485 3027 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 PROB1E7EW31 1015 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 H3BRB1 525 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 ENPP3O14638 875 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 PER2O15055 1255 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 CFBP00751 764 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 FGAP02671 866 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 HOXA13P31271 388 aaPredicted RBP9.34□□□□□ -0.91
LRP6-204ENST00000540415 GATMP50440 423 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 HNRNPUQ00839 825 aaKnown RBP eCLIP9.34□□□□□ -0.91
LRP6-204ENST00000540415 LPIN1Q14693 890 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 PAN2Q504Q3 1202 aaKnown RBP9.34□□□□□ -0.91
LRP6-204ENST00000540415 TBC1D10CQ8IV04 446 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 KLHL23Q8NBE8 558 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 APBB2Q92870 758 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 PDCD2LQ9BRP1 358 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 APOL5Q9BWW9 433 aa9.34□□□□□ -0.91
LRP6-204ENST00000540415 PHF7Q9BWX1 381 aaPredicted RBP9.34□□□□□ -0.91
LRP6-204ENST00000540415 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms