RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-206ENST00000540367 SFMBT2Q5VUG0 894 aa12.35□□□□□ -0.43
CPT1A-206ENST00000540367 C6orf89Q6UWU4 347 aa12.35□□□□□ -0.43
CPT1A-206ENST00000540367 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
CPT1A-206ENST00000540367 TAF1DQ9H5J8 278 aaPredicted RBP12.35□□□□□ -0.43
CPT1A-206ENST00000540367 NLRC4Q9NPP4 1024 aa12.35□□□□□ -0.43
CPT1A-206ENST00000540367 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
CPT1A-206ENST00000540367 NAPAP54920 295 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 TRADDQ15628 312 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 TXNRD3Q86VQ6 643 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 CCDC13Q8IYE1 715 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 C3orf20Q8ND61 904 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 LARP4BQ92615 738 aaKnown RBP12.34□□□□□ -0.43
CPT1A-206ENST00000540367 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-206ENST00000540367 TSG101Q99816 390 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 TACO1Q9BSH4 297 aaKnown RBP12.34□□□□□ -0.43
CPT1A-206ENST00000540367 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 ISCUQ9H1K1 167 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 RIC8AQ9NPQ8 531 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 TMEM59LQ9UK28 342 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 ATP6V0A2Q9Y487 856 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 PALM3A6NDB9 673 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-206ENST00000540367 CES2O00748 559 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 CHUKO15111 745 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 ZPR1O75312 459 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 RASSF9O75901 435 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 NOL4O94818 638 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 IFT88Q13099 833 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 SLC18A3Q16572 532 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 CCDC40Q4G0X9 1142 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 FAM83BQ5T0W9 1011 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 FBXO33Q7Z6M2 555 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 PROM2Q8N271 834 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 CYFIP2Q96F07 1278 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 PNMA5Q96PV4 448 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 LZTS2Q9BRK4 669 aa12.34□□□□□ -0.43
CPT1A-206ENST00000540367 BSDC1Q9NW68 430 aaPredicted RBP12.34□□□□□ -0.43
CPT1A-206ENST00000540367 ERCC3P19447 782 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 EHHADHQ08426 723 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 DYMQ7RTS9 669 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 DYNLL2Q96FJ2 89 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 JPH2Q9BR39 696 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-206ENST00000540367 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 C6orf50Q9HD87 102 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 KLC4Q9NSK0 619 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 PACSIN2Q9UNF0 486 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-206ENST00000540367 MINPP1Q9UNW1 487 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 ROBO3Q96MS0 1386 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 GCOM1H8Y6P7 765 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-206ENST00000540367 MYZAPP0CAP1 466 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 GNA11P29992 359 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 ECHS1P30084 290 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 HPDP32754 393 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-206ENST00000540367 HSD17B3P37058 310 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 ERVK-9P63128 1117 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 PSMD2Q13200 908 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 CUL1Q13616 776 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 ZKSCAN4Q969J2 545 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-206ENST00000540367 ACTR5Q9H9F9 607 aaPredicted RBP12.33□□□□□ -0.44
CPT1A-206ENST00000540367 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 COL4A3BPQ9Y5P4 624 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 ATAD5Q96QE3 1844 aa12.33□□□□□ -0.44
CPT1A-206ENST00000540367 USP17L3A6NCW0 530 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 USP17L4A6NCW7 530 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 H0YGN5 161 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 CCDC172P0C7W6 258 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 TXKP42681 527 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 HLTFQ14527 1009 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPT1A-206ENST00000540367 ZCWPW2Q504Y3 356 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 USP17L1Q7RTZ2 530 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 KLHL7Q8IXQ5 586 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 TBCKQ8TEA7 893 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 TAF4BQ92750 862 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 LRRC45Q96CN5 670 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 CDK5RAP3Q96JB5 506 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
CPT1A-206ENST00000540367 CD248Q9HCU0 757 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 PPANQ9NQ55 473 aaKnown RBP12.32□□□□□ -0.44
CPT1A-206ENST00000540367 NFS1Q9Y697 457 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 TSPY3P0CV98 308 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 TSPY8P0CW00 308 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 FXR2P51116 673 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPT1A-206ENST00000540367 POLR2FP61218 127 aaKnown RBP12.32□□□□□ -0.44
CPT1A-206ENST00000540367 BIRC3Q13489 604 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 UAP1Q16222 522 aaPredicted RBP12.32□□□□□ -0.44
CPT1A-206ENST00000540367 KIAA0753Q2KHM9 967 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 CCDC121Q6ZUS5 278 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 SLC44A5Q8NCS7 719 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 RAD54LQ92698 747 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 MTMR9Q96QG7 549 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 SLC40A1Q9NP59 571 aa12.32□□□□□ -0.44
CPT1A-206ENST00000540367 MYH4Q9Y623 1939 aa12.31□□□□□ -0.44
CPT1A-206ENST00000540367 A0A087X0T9 212 aa12.31□□□□□ -0.44
CPT1A-206ENST00000540367 GMNCA6NCL1 334 aa12.31□□□□□ -0.44
CPT1A-206ENST00000540367 BTNL10A8MVZ5 291 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms