RNA–Protein interactions for RNA: ENST00000540326.5

NEK6-213, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-213ENST00000540326 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 MPHOSPH10O00566 681 aaKnown RBP13.73□□□□□ -0.21
NEK6-213ENST00000540326 GOLGA6DP0CG33 693 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 PAFAH1B1P43034 410 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 CLK2P49760 499 aaKnown RBP13.73□□□□□ -0.21
NEK6-213ENST00000540326 ITIH3Q06033 890 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 SLC9C1Q4G0N8 1177 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 SFMBT2Q5VUG0 894 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 HAUS3Q68CZ6 603 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
NEK6-213ENST00000540326 PROM2Q8N271 834 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 PSTPIP2Q9H939 334 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 GOLGA6AQ9NYA3 693 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 STIM2Q9P246 746 aa13.73□□□□□ -0.21
NEK6-213ENST00000540326 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.72□□□□□ -0.21
NEK6-213ENST00000540326 SSU72P8A0A1W2PR75 194 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 POTECB2RU33 542 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
NEK6-213ENST00000540326 VPS72Q15906 364 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
NEK6-213ENST00000540326 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 TBC1D22AQ8WUA7 517 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 TBC1D5Q92609 795 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 MXD3Q9BW11 206 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
NEK6-213ENST00000540326 CEP72Q9P209 647 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 SERPINB13Q9UIV8 391 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 IGKV6D-41A0A0C4DH26 115 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 FTCDO95954 541 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
NEK6-213ENST00000540326 RAPGEF1Q13905 1077 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 CRY2Q49AN0 593 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 C8orf74Q6P047 294 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 FAM76AQ8TAV0 307 aa13.72□□□□□ -0.21
NEK6-213ENST00000540326 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■□□□□ 11.1
NEK6-213ENST00000540326 PACSIN2Q9UNF0 486 aaPredicted RBP13.72□□□□□ -0.21
NEK6-213ENST00000540326 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.72□□□□□ -0.21
NEK6-213ENST00000540326 PLIN4Q96Q06 1357 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 ZBTB5O15062 677 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 PALMO75781 387 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 STAT3P40763 770 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 RNASE9P60153 205 aaKnown RBP13.71□□□□□ -0.21
NEK6-213ENST00000540326 GPBP1Q86WP2 473 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 FAM133AQ8N9E0 248 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.21
NEK6-213ENST00000540326 RBM17Q96I25 401 aaKnown RBP13.71□□□□□ -0.21
NEK6-213ENST00000540326 RASSF4Q9H2L5 321 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 ADAMTS1Q9UHI8 967 aa13.71□□□□□ -0.21
NEK6-213ENST00000540326 NHSQ6T4R5 1651 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 ESYT3A0FGR9 886 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 ZSCAN5CA6NGD5 496 aaPredicted RBP13.71□□□□□ -0.22
NEK6-213ENST00000540326 SERPINB2P05120 415 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 SERPING1P05155 500 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 PLA2G4BP0C869 781 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 KLRC1P26715 233 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 SCNN1DP51172 638 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 SCFD1Q8WVM8 642 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 PACSIN1Q9BY11 444 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 EDEM3Q9BZQ6 932 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 TSPYL1Q9H0U9 437 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 LRRC4BQ9NT99 713 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 ATP6V0A2Q9Y487 856 aa13.71□□□□□ -0.22
NEK6-213ENST00000540326 A0A087X0T9 212 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 RBAK-RBAKDNI3L0D1 243 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 FAM228BP0C875 321 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 SHMT1P34896 483 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 EPHB4P54760 987 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 CFAP221Q4G0U5 840 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 RNF10Q8N5U6 811 aaKnown RBP13.7□□□□□ -0.22
NEK6-213ENST00000540326 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 NT5C3AQ9H0P0 336 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 RABEP2Q9H5N1 569 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 PCDHA2Q9Y5H9 948 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 KRT18P05783 430 aaKnown RBP13.7□□□□□ -0.22
NEK6-213ENST00000540326 GLI1P08151 1106 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 EPS15P42566 896 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 ADAM9Q13443 819 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 KIAA0753Q2KHM9 967 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 DNAJC21Q5F1R6 531 aaKnown RBP13.7□□□□□ -0.22
NEK6-213ENST00000540326 PPP1R18Q6NYC8 613 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 TRIM59Q8IWR1 403 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
NEK6-213ENST00000540326 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 EHD4Q9H223 541 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 USP40Q9NVE5 1235 aa13.7□□□□□ -0.22
NEK6-213ENST00000540326 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
NEK6-213ENST00000540326 POTEFA5A3E0 1075 aa13.69□□□□□ -0.22
NEK6-213ENST00000540326 PPFIA4O75335 1185 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms