RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

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Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PFDN2Q9UHV9 154 aa7.48□□□□□ -1.21
MRE11-209ENST00000540013 NRBP1Q9UHY1 535 aa7.48□□□□□ -1.21
MRE11-209ENST00000540013 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
MRE11-209ENST00000540013 CTNND2Q9UQB3 1225 aa7.48□□□□□ -1.21
MRE11-209ENST00000540013 LZTS1Q9Y250 596 aa7.48□□□□□ -1.21
MRE11-209ENST00000540013 ADGBQ8N7X0 1667 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 PREX1Q8TCU6 1659 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 DNAJC25-GNG10A0A024R161 153 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 CCDC163A0A0D9SF12 145 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 FKTNO75072 461 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 ZGLP1P0C6A0 271 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 SSRP1Q08945 709 aaKnown RBP7.47□□□□□ -1.21
MRE11-209ENST00000540013 RALGPS1Q5JS13 557 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 SLC4A10Q6U841 1118 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 CYP2R1Q6VVX0 501 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 TCEAL8Q8IYN2 117 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 LILRA2Q8N149 483 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 AFAP1L2Q8N4X5 818 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 ATL2Q8NHH9 583 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 ADAMTS10Q9H324 1103 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 TNFRSF10DQ9UBN6 386 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 MAPRE3Q9UPY8 281 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 EMC9Q9Y3B6 208 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 LRRC9Q6ZRR7 1453 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 C3P01024 1663 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 MAP3K1Q13233 1512 aa7.47□□□□□ -1.21
MRE11-209ENST00000540013 PLXNC1O60486 1568 aa7.46□□□□□ -1.21
MRE11-209ENST00000540013 TMEM82A0PJX8 343 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 GOLGA6CA6NDK9 693 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 GOLGA6BA6NDN3 693 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 RBAK-RBAKDNI3L0D1 243 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 IRS4O14654 1257 aaPredicted RBP7.46□□□□□ -1.22
MRE11-209ENST00000540013 RFPL3O75679 317 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 CD3EP07766 207 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 GSTM1P09488 218 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 GOLGA6DP0CG33 693 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 MCCP23508 829 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 HK2P52789 917 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 PIN1Q13526 163 aaPredicted RBP7.46□□□□□ -1.22
MRE11-209ENST00000540013 NR0B2Q15466 257 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 EEF1DP3Q658K8 133 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 MRM1Q6IN84 353 aaKnown RBP7.46□□□□□ -1.22
MRE11-209ENST00000540013 SPATC1Q76KD6 591 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 NAT16Q8N8M0 369 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 LINC01599Q8WXQ3 324 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 MAP6Q96JE9 813 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 CAMKK2Q96RR4 588 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 SLC12A9Q9BXP2 914 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 ZHX3Q9H4I2 956 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 GOLGA6AQ9NYA3 693 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 APEX2Q9UBZ4 518 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 ZNF69Q9UC07 566 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 MRPS23Q9Y3D9 190 aaKnown RBP7.46□□□□□ -1.22
MRE11-209ENST00000540013 CAMSAP2Q08AD1 1489 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 MBD5Q9P267 1494 aa7.46□□□□□ -1.22
MRE11-209ENST00000540013 ZNF644Q9H582 1327 aaPredicted RBP7.46□□□□□ -1.22
MRE11-209ENST00000540013 CNTLNQ9NXG0 1405 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 MROH2AA6NES4 1674 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 A2MP01023 1474 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 CCDC141Q6ZP82 1450 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 TRBV23OR9-2A0A075B6M9 112 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 KATNA1O75449 491 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 HPXP02790 462 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 CEBPAP49715 358 aaPredicted RBP7.45□□□□□ -1.22
MRE11-209ENST00000540013 PURAQ00577 322 aaKnown RBP7.45□□□□□ -1.22
MRE11-209ENST00000540013 FAM102BQ5T8I3 360 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 RCSD1Q6JBY9 416 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 NECAB2Q7Z6G3 386 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 DGKHQ86XP1 1220 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 KSR1Q8IVT5 923 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 TRIM59Q8IWR1 403 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 SPICE1Q8N0Z3 855 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 ZNF513Q8N8E2 541 aaPredicted RBP7.45□□□□□ -1.22
MRE11-209ENST00000540013 MYRIPQ8NFW9 859 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
MRE11-209ENST00000540013 RTEL1-TNFRSF6BF6WH68 1400 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 GSG1L2A8MUP6 293 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 TBC1D8O95759 1140 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 CPEP16870 476 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 ITGB5P18084 799 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 TRAPPC10P48553 1259 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 SEPHS1P49903 392 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 SNX17Q15036 470 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 MLC1Q15049 377 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 SLC14A2Q15849 920 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 LONRF2Q1L5Z9 754 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 GFOD2Q3B7J2 385 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 SLC10A6Q3KNW5 377 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 HLA-DQA1Q5Y7H0 255 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 LRRC47Q8N1G4 583 aaKnown RBP7.44□□□□□ -1.22
MRE11-209ENST00000540013 UBR7Q8N806 425 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 TEX19Q8NA77 164 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.44□□□□□ -1.22
MRE11-209ENST00000540013 MYLIPQ8WY64 445 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 FCRL3Q96P31 734 aaPredicted RBP7.44□□□□□ -1.22
MRE11-209ENST00000540013 PPCSQ9HAB8 311 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 AP5S1Q9NUS5 200 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 TAGLN3Q9UI15 199 aa7.44□□□□□ -1.22
MRE11-209ENST00000540013 BACE2Q9Y5Z0 518 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms