RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
SLC3A2-215ENST00000539891 SH3GLB2Q9NR46 395 aa12.37□□□□□ -0.43
SLC3A2-215ENST00000539891 WDR81Q562E7 1941 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 TET1Q8NFU7 2136 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 H3BRB1 525 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 NOP56O00567 594 aaKnown RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 CPLX1O14810 134 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 SORBS3O60504 671 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 ATP9AO75110 1047 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 SEC24BO95487 1268 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 LGALS2P05162 132 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 ZNF286BP0CG31 522 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 PTGISQ16647 500 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 GDF6Q6KF10 455 aaPredicted RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 PSRC1Q6PGN9 363 aaPredicted RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 TRIM22Q8IYM9 498 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 FAM177A1Q8N128 213 aaPredicted RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 REXO1Q8N1G1 1221 aaKnown RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 C7orf31Q8N865 590 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.36□□□□□ -0.431e-10■■■□□ 15.5
SLC3A2-215ENST00000539891 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 TUT1Q9H6E5 874 aaKnown RBP12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 IL23AQ9NPF7 189 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 HDAC6Q9UBN7 1215 aa12.36□□□□□ -0.43
SLC3A2-215ENST00000539891 MEIS1O00470 390 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 DEXIO95424 95 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 CYP3A4P08684 503 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 HOXC8P31273 242 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 CCL23P55773 120 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 CHMP4BP1P59074 171 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 ARHGAP4P98171 946 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 SSRP1Q08945 709 aaKnown RBP12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 RBL2Q08999 1139 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 BFSP2Q13515 415 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 JAKMIP3Q5VZ66 844 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 CAGE1Q8TC20 777 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 RNPC3Q96LT9 517 aaKnown RBP12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 ALG1Q9BT22 464 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 KCNH7Q9NS40 1196 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
SLC3A2-215ENST00000539891 MYH9P35579 1960 aaKnown RBP12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 NFASCO94856 1347 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 COL6A3P12111 3177 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 GBF1Q92538 1859 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 PFKFB2O60825 505 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 PPFIA3O75145 1194 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 RFC2P35250 354 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 AK2P54819 239 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 SCRN1Q12765 414 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 STK3Q13188 491 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 FAM109BQ6ICB4 259 aaPredicted RBP12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 ZNF365Q70YC5 407 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 RPUSD2Q8IZ73 545 aaKnown RBP12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 CCDC155Q8N6L0 562 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 CYP2W1Q8TAV3 490 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 SEPT1Q8WYJ6 367 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 HERVK_113Q902F9 699 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 VWCEQ96DN2 955 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 TELO2Q9Y4R8 837 aa12.34□□□□□ -0.43
SLC3A2-215ENST00000539891 GSTTP1A0A1W2PQM5 241 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 ADAMTS3O15072 1205 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 CDKL5O76039 1030 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 PFKMP08237 780 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 IQCF3P0C7M6 154 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 ARP10275 920 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 ACRP10323 421 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 TCF7P36402 384 aaPredicted RBP12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 PTK7Q13308 1070 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 C8orf34Q49A92 452 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 RETREG2Q8NC44 543 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 AFAP1L1Q8TED9 768 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 DHX38Q92620 1227 aaKnown RBP12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 SCLYQ96I15 445 aa12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 SLKQ9H2G2 1235 aaPredicted RBP12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 AGO4Q9HCK5 861 aaKnown RBP12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.44
SLC3A2-215ENST00000539891 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 FAM86B1E9PN63 330 aa12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 M0R2N6 131 aa12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 PARNO95453 639 aaKnown RBP12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 FGBP02675 491 aa12.32□□□□□ -0.44
SLC3A2-215ENST00000539891 FAM86B2P0C5J1 330 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms