RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 SENP7Q9BQF6 1050 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 C16orf70Q9BSU1 422 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 LSG1Q9H089 658 aaKnown RBP17.59■□□□□ 0.41
UBE3B-211ENST00000539843 PSTPIP2Q9H939 334 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 PRDM6Q9NQX0 595 aa17.59■□□□□ 0.41
UBE3B-211ENST00000539843 POU3F3P20264 500 aaPredicted RBP17.58■□□□□ 0.4
UBE3B-211ENST00000539843 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
UBE3B-211ENST00000539843 TAP1Q03518 808 aa17.58■□□□□ 0.4
UBE3B-211ENST00000539843 USP17L6PQ6QN14 398 aa17.58■□□□□ 0.4
UBE3B-211ENST00000539843 RAD9AQ99638 391 aa17.58■□□□□ 0.4
UBE3B-211ENST00000539843 RBM28Q9NW13 759 aaKnown RBP17.58■□□□□ 0.4
UBE3B-211ENST00000539843 SCN5AQ14524 2016 aa17.58■□□□□ 0.4
UBE3B-211ENST00000539843 CDH23Q9H251 3354 aa17.58■□□□□ 0.4
UBE3B-211ENST00000539843 GBF1Q92538 1859 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 GJB5O95377 273 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 ZNF200P98182 395 aaPredicted RBP17.57■□□□□ 0.4
UBE3B-211ENST00000539843 SP4Q02446 784 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 UTP14CQ5TAP6 766 aaKnown RBP17.57■□□□□ 0.4
UBE3B-211ENST00000539843 MICU3Q86XE3 530 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 ADAMTS19Q8TE59 1207 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 SEPT8Q92599 483 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 GPKOWQ92917 476 aaPredicted RBP eCLIP17.57■□□□□ 0.4
UBE3B-211ENST00000539843 GPRASP2Q96D09 838 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 GPR20Q99678 358 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 COG5Q9UP83 839 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 MTCH2Q9Y6C9 303 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 MYO9BQ13459 2157 aa17.57■□□□□ 0.4
UBE3B-211ENST00000539843 A0A0C4DFX4 3053 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 PLEKHA8P1O95397 391 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 DEFB103AP81534 67 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 TRIM71Q2Q1W2 868 aaKnown RBP17.56■□□□□ 0.4
UBE3B-211ENST00000539843 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 CENPQQ7L2Z9 268 aaPredicted RBP17.56■□□□□ 0.4
UBE3B-211ENST00000539843 HEATR3Q7Z4Q2 680 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 RSPH3Q86UC2 560 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 TEX2Q8IWB9 1127 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 SRBD1Q8N5C6 995 aaKnown RBP17.56■□□□□ 0.4
UBE3B-211ENST00000539843 FANCBQ8NB91 859 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
UBE3B-211ENST00000539843 TGS1Q96RS0 853 aaKnown RBP17.56■□□□□ 0.4
UBE3B-211ENST00000539843 UHRF1Q96T88 793 aaPredicted RBP17.56■□□□□ 0.4
UBE3B-211ENST00000539843 RNPEPQ9H4A4 650 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 INSL6Q9Y581 213 aa17.56■□□□□ 0.4
UBE3B-211ENST00000539843 UNC80Q8N2C7 3258 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 NRCAMQ92823 1304 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 MEIS2O14770 477 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 MAFGO15525 162 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 RXRAP19793 462 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 ARHGAP4P98171 946 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 MTMR1Q13613 665 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 KRT32Q14532 448 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 MYOCDQ8IZQ8 938 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 APBB2Q92870 758 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 LMCD1Q9NZU5 365 aa17.55■□□□□ 0.4
UBE3B-211ENST00000539843 RFXAPO00287 272 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 TREHO43280 583 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
UBE3B-211ENST00000539843 CTSHP09668 335 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 FGD1P98174 961 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 GPNMBQ14956 572 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 FAM117BQ6P1L5 589 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 TAF2Q6P1X5 1199 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 SGMS1Q86VZ5 419 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 CCDC82Q8N4S0 544 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 DBF4BQ8NFT6 615 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 NEK1Q96PY6 1258 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 GLT8D2Q9H1C3 349 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 ERAP1Q9NZ08 941 aa17.54■□□□□ 0.4
UBE3B-211ENST00000539843 BAZ2BQ9UIF8 2168 aaKnown RBP17.54■□□□□ 0.4
UBE3B-211ENST00000539843 hCG_1984214I3L0E3 225 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 HOXC8P31273 242 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 TCF7P36402 384 aaPredicted RBP17.53■□□□□ 0.4
UBE3B-211ENST00000539843 NAPAP54920 295 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 SEMA3FQ13275 785 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 GRB10Q13322 594 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 PLEKHG4Q58EX7 1191 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 PPP1R18Q6NYC8 613 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 CMTR1Q8N1G2 835 aaKnown RBP17.53■□□□□ 0.4
UBE3B-211ENST00000539843 ZNF713Q8N859 430 aaPredicted RBP17.53■□□□□ 0.4
UBE3B-211ENST00000539843 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 GLG1Q92896 1179 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 WNT8BQ93098 351 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 SAMD11Q96NU1 681 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 YME1L1Q96TA2 773 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 MTUS1Q9ULD2 1270 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 TRIP12Q14669 1992 aaPredicted RBP17.53■□□□□ 0.4
UBE3B-211ENST00000539843 MYH7BA7E2Y1 1941 aa17.53■□□□□ 0.4
UBE3B-211ENST00000539843 HMGB1P09429 215 aaKnown RBP17.52■□□□□ 0.4
UBE3B-211ENST00000539843 PPFIA1Q13136 1202 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 RTN1Q16799 776 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 TRAF7Q6Q0C0 670 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 TMCO2Q7Z6W1 182 aaPredicted RBP17.52■□□□□ 0.4
UBE3B-211ENST00000539843 TRIM50Q86XT4 487 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 RAB11FIP4Q86YS3 637 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 HLA-CQ95604 372 aa17.52■□□□□ 0.4
UBE3B-211ENST00000539843 SDF4Q9BRK5 362 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms