RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CCZ1P86791 482 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 CACNB1Q02641 598 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 TMEM132BQ14DG7 1078 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 KRT31Q15323 416 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 TTI2Q6NXR4 508 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 CCDC150Q8NCX0 1101 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 POLR3CQ9BUI4 534 aaPredicted RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 ELP3Q9H9T3 547 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 PANK4Q9NVE7 773 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 LIMA1Q9UHB6 759 aaKnown RBP25.04■■□□□ 1.6
HOMER3-204ENST00000539827 DNM3Q9UQ16 869 aa25.04■■□□□ 1.6
HOMER3-204ENST00000539827 OTOFQ9HC10 1997 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 KCNJ18B7U540 433 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 CYP11B2P19099 503 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 IREB2P48200 963 aaKnown RBP25.03■■□□□ 1.6
HOMER3-204ENST00000539827 RAD51AP2Q09MP3 1159 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 COASYQ13057 564 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 PABPC4Q13310 644 aaKnown RBP eCLIP25.03■■□□□ 1.6
HOMER3-204ENST00000539827 PPP2R5CQ13362 524 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 CTTNQ14247 550 aaKnown RBP25.03■■□□□ 1.6
HOMER3-204ENST00000539827 KCNJ12Q14500 433 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 SAMD3Q8N6K7 520 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 DYDC2Q96IM9 177 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 DUSP9Q99956 384 aaKnown RBP25.03■■□□□ 1.6
HOMER3-204ENST00000539827 SRRTQ9BXP5 876 aaKnown RBP25.03■■□□□ 1.6
HOMER3-204ENST00000539827 WDR11Q9BZH6 1224 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 UNC45AQ9H3U1 944 aa25.03■■□□□ 1.6
HOMER3-204ENST00000539827 ADD3Q9UEY8 706 aaKnown RBP25.03■■□□□ 1.6
HOMER3-204ENST00000539827 GOLGA8FQ08AF8 430 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 GOLGA8DPQ0D2H9 430 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 BAATQ14032 418 aaPredicted RBP25.02■■□□□ 1.6
HOMER3-204ENST00000539827 TCP11X2Q5H9J9 407 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 ANKRD40Q6AI12 368 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 RBM46Q8TBY0 533 aaKnown RBP25.02■■□□□ 1.6
HOMER3-204ENST00000539827 CTAGE1Q96RT6 745 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 TEKT3Q9BXF9 490 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 TAB2Q9NYJ8 693 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 ZNF214Q9UL59 606 aaPredicted RBP25.02■■□□□ 1.6
HOMER3-204ENST00000539827 SPDYE16A6NNV3 312 aaPredicted RBP25.02■■□□□ 1.6
HOMER3-204ENST00000539827 MYCLP12524 364 aaPredicted RBP25.02■■□□□ 1.6
HOMER3-204ENST00000539827 SKILP12757 684 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 PPP1R2P41236 205 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 MRPS9P82933 396 aaKnown RBP25.02■■□□□ 1.6
HOMER3-204ENST00000539827 EHHADHQ08426 723 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 FILIP1LQ4L180 1135 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 COBLL1Q53SF7 1204 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 TREML2Q5T2D2 321 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 PCNX4Q63HM2 1172 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 IRF2BP1Q8IU81 584 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 UBIAD1Q9Y5Z9 338 aa25.02■■□□□ 1.6
HOMER3-204ENST00000539827 DDX39AO00148 427 aaKnown RBP25.01■■□□□ 1.59
HOMER3-204ENST00000539827 IPO5O00410 1097 aaKnown RBP25.01■■□□□ 1.59
HOMER3-204ENST00000539827 KRT18P05783 430 aaKnown RBP25.01■■□□□ 1.59
HOMER3-204ENST00000539827 SFPQP23246 707 aaKnown RBP eCLIP25.01■■□□□ 1.59
HOMER3-204ENST00000539827 OAZ1P54368 228 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 SPAG1Q07617 926 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 TTLL12Q14166 644 aaPredicted RBP25.01■■□□□ 1.59
HOMER3-204ENST00000539827 PLS1Q14651 629 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 PGM5Q15124 567 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 LRRC41Q15345 812 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 TKFCQ3LXA3 575 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 EAPPQ56P03 285 aaPredicted RBP25.01■■□□□ 1.59
HOMER3-204ENST00000539827 ARSHQ5FYA8 562 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 GLIS3Q8NEA6 775 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 CLMNQ96JQ2 1002 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 RMDN3Q96TC7 470 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 VPS16Q9H269 839 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 SEMA6BQ9H3T3 888 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 HOXC10Q9NYD6 342 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 PAPPA2Q9BXP8 1791 aa25.01■■□□□ 1.59
HOMER3-204ENST00000539827 FRMPD4Q14CM0 1322 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 BICDL2A1A5D9 508 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 COPB1P53618 953 aaKnown RBP25■■□□□ 1.59
HOMER3-204ENST00000539827 PSMD2Q13200 908 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 TPH2Q8IWU9 490 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 HSD17B14Q9BPX1 270 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 KCNH7Q9NS40 1196 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 SLITRK3O94933 977 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 ARHGEF16Q5VV41 709 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 SPECC1LQ69YQ0 1117 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 CCDC65Q8IXS2 484 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 SYT2Q8N9I0 419 aaPredicted RBP25■■□□□ 1.59
HOMER3-204ENST00000539827 THAP9Q9H5L6 903 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 PXMP2Q9NR77 195 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 SPTLC3Q9NUV7 552 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 TBC1D7Q9P0N9 293 aa25■■□□□ 1.59
HOMER3-204ENST00000539827 GLTPD2A6NH11 291 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 BCRP11274 1271 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 NF2P35240 595 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 TBX2Q13207 712 aaPredicted RBP24.99■■□□□ 1.59
HOMER3-204ENST00000539827 GADL1Q6ZQY3 521 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 NIPA1Q7RTP0 329 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 CSGALNACT2Q8N6G5 542 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 ANKRD20A12PQ8NF67 263 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 OTUD5Q96G74 571 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 TUFT1Q9NNX1 390 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 JADE2Q9NQC1 790 aa24.99■■□□□ 1.59
HOMER3-204ENST00000539827 OFD1O75665 1012 aa24.98■■□□□ 1.59
HOMER3-204ENST00000539827 ZC3H15Q8WU90 426 aaKnown RBP24.98■■□□□ 1.59
HOMER3-204ENST00000539827 PDCD2LQ9BRP1 358 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms