RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CCNT1O60563 726 aaKnown RBP14.75□□□□□ -0.05
CCDC42-202ENST00000539522 RARBP10826 455 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 HOXD8P13378 290 aaPredicted RBP14.75□□□□□ -0.05
CCDC42-202ENST00000539522 PDCP20941 246 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 CST5P28325 142 aaPredicted RBP14.75□□□□□ -0.05
CCDC42-202ENST00000539522 SOX10P56693 466 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 MCTP1Q6DN14 999 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 CYFIP1Q7L576 1253 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 NLRX1Q86UT6 975 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 AFG1LQ8WV93 481 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 MTMR9Q96QG7 549 aa14.75□□□□□ -0.05
CCDC42-202ENST00000539522 DDX25Q9UHL0 483 aaKnown RBP14.75□□□□□ -0.05
CCDC42-202ENST00000539522 SCN10AQ9Y5Y9 1956 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 NFASCO94856 1347 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 GSTTP1A0A1W2PQM5 241 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 MSCO60682 206 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 PSMD10O75832 226 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 BRD1O95696 1058 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 MMP3P08254 477 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 COL6A1P12109 1028 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 ATP2B1P20020 1258 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 ZNF76P36508 570 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 SPIRE1Q08AE8 756 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 ZNF174Q15697 407 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 IL17AQ16552 155 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 GNPTABQ3T906 1256 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 OR6J1Q8NGC5 347 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 PCYT2Q99447 389 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 GPR20Q99678 358 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.74□□□□□ -0.05
CCDC42-202ENST00000539522 VAV3Q9UKW4 847 aa14.74□□□□□ -0.05
CCDC42-202ENST00000539522 GRIN2DO15399 1336 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 IPO5O00410 1097 aaKnown RBP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 NKRFO15226 690 aaKnown RBP eCLIP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 MAFGO15525 162 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 GH1P01241 217 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 ZSCAN22P10073 491 aaPredicted RBP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 SETQ01105 290 aaPredicted RBP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 KCNA10Q16322 511 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 FSCN1Q16658 493 aaKnown RBP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 TTC38Q5R3I4 469 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 FOXD4L5Q5VV16 416 aaPredicted RBP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 KCNV1Q6PIU1 500 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 METTL7BQ6UX53 244 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 FOXD4L4Q8WXT5 416 aaPredicted RBP14.73□□□□□ -0.05
CCDC42-202ENST00000539522 KAT2BQ92831 832 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 ZNF577Q9BSK1 485 aa14.73□□□□□ -0.05
CCDC42-202ENST00000539522 CCDC85CA6NKD9 419 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 ATG7O95352 703 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 F13A1P00488 732 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 C6orf222P0C671 652 aaPredicted RBP14.72□□□□□ -0.05
CCDC42-202ENST00000539522 GCFC2P16383 781 aaKnown RBP14.72□□□□□ -0.05
CCDC42-202ENST00000539522 MCM7P33993 719 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 TRAPPC10P48553 1259 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 DHX37Q8IY37 1157 aaKnown RBP14.72□□□□□ -0.05
CCDC42-202ENST00000539522 PPTC7Q8NI37 304 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 PPP1R13LQ8WUF5 828 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 CDHR1Q96JP9 859 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 C16orf70Q9BSU1 422 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 UNC45AQ9H3U1 944 aa14.72□□□□□ -0.05
CCDC42-202ENST00000539522 IGKV6D-21A0A0A0MT36 114 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 RBAK-RBAKDNI3L0D1 243 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 DDX39AO00148 427 aaKnown RBP14.71□□□□□ -0.05
CCDC42-202ENST00000539522 EML1O00423 815 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 DNM1LO00429 736 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
CCDC42-202ENST00000539522 ASGR1P07306 291 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 ACLYP53396 1101 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 PURAQ00577 322 aaKnown RBP14.71□□□□□ -0.05
CCDC42-202ENST00000539522 LAMC2Q13753 1193 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 NEDD9Q14511 834 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 PTPAQ15257 358 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 GNASQ5JWF2 1037 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 BRAPQ7Z569 592 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 SPATA33Q96N06 139 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 TMEM106CQ9BVX2 250 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 PHF24Q9UPV7 400 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 CLIC4Q9Y696 253 aa14.71□□□□□ -0.05
CCDC42-202ENST00000539522 TCHHQ07283 1943 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 NEMFO60524 1076 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 ZNF286BP0CG31 522 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 ATP4AP20648 1035 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 ACTR2P61160 394 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 SP4Q02446 784 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 HIC1Q14526 733 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 RILPL1Q5EBL4 403 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 CXCL17Q6UXB2 119 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 ABHD15Q6UXT9 468 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 TRIM50Q86XT4 487 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 USP28Q96RU2 1077 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 RIT2Q99578 217 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 AP5M1Q9H0R1 490 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 JPH1Q9HDC5 661 aaPredicted RBP14.7□□□□□ -0.06
CCDC42-202ENST00000539522 SLC9A2Q9UBY0 812 aa14.7□□□□□ -0.06
CCDC42-202ENST00000539522 A0A1W2PQ45 241 aaPredicted RBP14.69□□□□□ -0.06
CCDC42-202ENST00000539522 A0A1W2PQY0 241 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 HAS3O00219 553 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 TBX3O15119 743 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 LGR5O75473 907 aa14.69□□□□□ -0.06
CCDC42-202ENST00000539522 PSMC6P62333 389 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms