RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 ADRM1Q16186 407 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FXNQ16595 210 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TRIM71Q2Q1W2 868 aaKnown RBP6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MSL1Q68DK7 614 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ENGASEQ8NFI3 743 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CAVIN3Q969G5 261 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FAM136AQ96C01 138 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FGD4Q96M96 766 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RMND1Q9NWS8 449 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IFNKQ9P0W0 207 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SUGT1Q9Y2Z0 365 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 EP400Q96L91 3159 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CNTNAP4Q9C0A0 1308 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 COL4A1P02462 1669 aa6.31□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TBKBP1A7MCY6 615 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IDH1O75874 414 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SLC5A1P13866 664 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IGHMBP2P38935 993 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SERPINB8P50452 374 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TUBP50607 506 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PPIDQ08752 370 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDCLQ13371 301 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RASGRF1Q13972 1273 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IMMTQ16891 758 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FOXB2Q5VYV0 432 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ADALQ6DHV7 355 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IRGCQ6NXR0 463 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AOPEPQ8N6M6 819 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IFT81Q8WYA0 676 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DDX12PQ92771 950 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HNRNPABQ99729 332 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CLK4Q9HAZ1 481 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GINM1Q9NU53 330 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HSFX1Q9UBD0 423 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 USP21Q9UK80 565 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NR2E3Q9Y5X4 410 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 COMMD3-BMI1R4GMX3 469 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 THSD7AQ9UPZ6 1657 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HAND2P61296 217 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 AKAP17AQ02040 695 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ITIH3Q06033 890 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 UBE3CQ15386 1083 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC153Q494R4 210 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CHST3Q7LGC8 479 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF572Q7Z3I7 529 aaPredicted RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TTC30AQ86WT1 665 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FBXL16Q8N461 479 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TTC39CQ8N584 583 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MLKLQ8NB16 471 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SPATA5Q8NB90 893 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GDAP1Q8TB36 358 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ATP8B4Q8TF62 1192 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SREK1Q8WXA9 508 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 RNF25Q96BH1 459 aaPredicted RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CLIP3Q96DZ5 547 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ABHD8Q96I13 439 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PANX2Q96RD6 677 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SEZ6LQ9BYH1 1024 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 HSD3B7Q9H2F3 369 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 VCXQ9H320 206 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BAIAP2L1Q9UHR4 511 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 R3HDM2Q9Y2K5 976 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PPME1Q9Y570 386 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PCDHB2Q9Y5E7 798 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SPATA31A6Q5VVP1 1343 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF532Q9HCE3 1301 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MYH7P12883 1935 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TCRBV5S4A2TA0A5A2 114 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 IFIT3O14879 490 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PDE6AP16499 860 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CHRNDQ07001 517 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MAP7Q14244 749 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 COL19A1Q14993 1142 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ARHGEF6Q15052 776 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ERFEQ4G0M1 354 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CCDC70Q6NSX1 233 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 C3orf67Q6ZVT6 689 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SMIM5Q71RC9 77 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 ZNF804AQ7Z570 1209 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NANOGNBQ7Z5D8 188 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 FERMT3Q86UX7 667 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 BPHLQ86WA6 291 aaPredicted RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MYO1HQ8N1T3 1032 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NOA1Q8NC60 698 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SH3TC2Q8TF17 1288 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LRRC45Q96CN5 670 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 GDAP1L1Q96MZ0 367 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TCHPQ9BT92 498 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 NAA15Q9BXJ9 866 aaKnown RBP6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SYNCQ9H7C4 482 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 DKK3Q9UBP4 350 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 WWC3Q9ULE0 1092 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 LEMD3Q9Y2U8 911 aa6.3□□□□□ -1.4
RAB3GAP1-207ENST00000539493 SCN7AQ01118 1682 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 CTAGE9A4FU28 777 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TRIM43BA6NCK2 446 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 TRAPPC3O43617 180 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 MGEA5O60502 916 aa6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PORP16435 677 aaPredicted RBP6.29□□□□□ -1.4
RAB3GAP1-207ENST00000539493 PMS2P54278 862 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms