RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 PXMP2Q9NR77 195 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 SERTAD1Q9UHV2 236 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
RTN4IP1-204ENST00000539449 DOCK3Q8IZD9 2030 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 ADGRA2Q96PE1 1338 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 MGAMO43451 1857 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 SYCE3A1L190 88 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 LAD1O00515 517 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 MSH4O15457 936 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 MYCLP12524 364 aaPredicted RBP10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 GCFC2P16383 781 aaKnown RBP10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZNF76P36508 570 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 SYKP43405 635 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 PGM5Q15124 567 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 LONRF3Q496Y0 759 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 Q4G0T1 1027 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 CCDC183Q5T5S1 534 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 NECAB2Q7Z6G3 386 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 GAS2L3Q86XJ1 694 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 PLA2G4DQ86XP0 818 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 TEX2Q8IWB9 1127 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 PDILTQ8N807 584 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 ETNPPLQ8TBG4 499 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 FGD4Q96M96 766 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 RMDN3Q96TC7 470 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 CDX2Q99626 313 aaPredicted RBP10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 MXRA8Q9BRK3 442 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 PDCD2LQ9BRP1 358 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 MMTAG2Q9BU76 263 aaKnown RBP10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 KCNH3Q9ULD8 1083 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 UBIAD1Q9Y5Z9 338 aa10.36□□□□□ -0.75
RTN4IP1-204ENST00000539449 WDR81Q562E7 1941 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 A0A087WWV3 80 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 POTEMA6NI47 508 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 MEIS1O00470 390 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 POLR2DO15514 142 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 PGK2P07205 417 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 ITGB5P18084 799 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 LONP1P36776 959 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 KARSQ15046 597 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 ARHGEF16Q5VV41 709 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 PCNX4Q63HM2 1172 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 C17orf99Q6UX52 265 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 CKAP2LQ8IYA6 745 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 GRAMD1CQ8IYS0 662 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 IGSF22Q8N9C0 903 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 SLAIN1Q8ND83 568 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 DIS3LQ8TF46 1054 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 DEFB118Q96PH6 123 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 PNMA5Q96PV4 448 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 PLIN2Q99541 437 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 NAP1L4Q99733 375 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 WDR11Q9BZH6 1224 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 NUP62CLQ9H1M0 184 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 TTC12Q9H892 705 aaPredicted RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 EHMT1Q9H9B1 1298 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZCCHC17Q9NP64 241 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 DDX19AQ9NUU7 478 aaKnown RBP10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 FAM13BQ9NYF5 915 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 MORF4L1Q9UBU8 362 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 CPA4Q9UI42 421 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 NCOR1O75376 2440 aa10.35□□□□□ -0.75
RTN4IP1-204ENST00000539449 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 SLC25A27O95847 323 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 NR3C2P08235 984 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 PRKCZQ05513 592 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 SPIRE1Q08AE8 756 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 E2F4Q16254 413 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 ECM1Q16610 540 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 CEP55Q53EZ4 464 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 TJAP1Q5JTD0 557 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 ZNF697Q5TEC3 545 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 KRBA2Q6ZNG9 492 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 RBM43Q6ZSC3 357 aaKnown RBP10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 VSIG10LQ86VR7 867 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 ANKRD35Q8N283 1001 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 FAM133AQ8N9E0 248 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 GPRC5AQ8NFJ5 357 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 SMCR8Q8TEV9 937 aaPredicted RBP10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 SLC5A5Q92911 643 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 DHX58Q96C10 678 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 CCSER1Q9C0I3 900 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 CRISPLD2Q9H0B8 497 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 TNMDQ9H2S6 317 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 BCAS3Q9H6U6 928 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 PKD2L1Q9P0L9 805 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 FBXO40Q9UH90 709 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 VAV3Q9UKW4 847 aa10.34□□□□□ -0.75
RTN4IP1-204ENST00000539449 PIEZO1Q92508 2521 aa10.33□□□□□ -0.76
RTN4IP1-204ENST00000539449 BDP1A6H8Y1 2624 aa10.33□□□□□ -0.76
RTN4IP1-204ENST00000539449 DNAJC25-GNG10A0A024R161 153 aa10.33□□□□□ -0.76
RTN4IP1-204ENST00000539449 C19orf67A6NJJ6 358 aa10.33□□□□□ -0.76
RTN4IP1-204ENST00000539449 EML1O00423 815 aa10.33□□□□□ -0.76
RTN4IP1-204ENST00000539449 MARCH6O60337 910 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms