RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 PSMD10O75832 226 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 PGK2P07205 417 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 ARP10275 920 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 UBA7P41226 1012 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 VEGFBP49765 207 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 PDE4DQ08499 809 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
LEMD3-202ENST00000539442 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 SPECC1Q5M775 1068 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 CCDC183Q5T5S1 534 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 CAVIN1Q6NZI2 390 aaKnown RBP12□□□□□ -0.49
LEMD3-202ENST00000539442 SOCS4Q8WXH5 440 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 TIGD1Q96MW7 591 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 TEKT3Q9BXF9 490 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
LEMD3-202ENST00000539442 TBC1D22BQ9NU19 505 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 USP25Q9UHP3 1055 aa12□□□□□ -0.49
LEMD3-202ENST00000539442 CTAGE5O15320 804 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 GAS7O60861 476 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 RGS20O76081 388 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 ZNF202O95125 648 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 ICAM3P32942 547 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 SPIRE1Q08AE8 756 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 MAP2K5Q13163 448 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 PPP2R5CQ13362 524 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 MORN1Q5T089 497 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 LRCH2Q5VUJ6 765 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 KRT79Q5XKE5 535 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 HAUS3Q68CZ6 603 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 DPP9Q86TI2 863 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 CABP7Q86V35 215 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 ELOA2Q8IYF1 753 aaPredicted RBP11.99□□□□□ -0.49
LEMD3-202ENST00000539442 MSL3Q8N5Y2 521 aaKnown RBP11.99□□□□□ -0.49
LEMD3-202ENST00000539442 ERMNQ8TAM6 284 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 CCDC34Q96HJ3 373 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 EPSTI1Q96J88 318 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 NUP62CLQ9H1M0 184 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 CLSTN2Q9H4D0 955 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 TMEM63CQ9P1W3 806 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 CCDC39Q9UFE4 941 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 VAV3Q9UKW4 847 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 KDM3AQ9Y4C1 1321 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 PLXNB2O15031 1838 aa11.99□□□□□ -0.49
LEMD3-202ENST00000539442 NFASCO94856 1347 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 SPATA31C2B4DYI2 1134 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 COBLO75128 1261 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 LETM1O95202 739 aaPredicted RBP11.98□□□□□ -0.49
LEMD3-202ENST00000539442 HOXC6P09630 235 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 FCGRTP55899 365 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 KCNV1Q6PIU1 500 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 B3GNT9Q6UX72 402 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 MAMDC4Q6UXC1 1216 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 OTOP1Q7RTM1 612 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 KCTD17Q8N5Z5 321 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 IQUBQ8NA54 791 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 SNX29Q8TEQ0 813 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 CALML4Q96GE6 196 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
LEMD3-202ENST00000539442 SENP7Q9BQF6 1050 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 CUEDC2Q9H467 287 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 DISC1Q9NRI5 854 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 TCEAL9Q9UHQ7 104 aa11.98□□□□□ -0.49
LEMD3-202ENST00000539442 SYNGAP1Q96PV0 1343 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 PP2D1A8MPX8 630 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 TNPO2O14787 897 aaKnown RBP11.97□□□□□ -0.49
LEMD3-202ENST00000539442 POLR2DO15514 142 aaKnown RBP11.97□□□□□ -0.49
LEMD3-202ENST00000539442 DHX15O43143 795 aaKnown RBP11.97□□□□□ -0.49
LEMD3-202ENST00000539442 TGFB3P10600 412 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 MUTP22033 750 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 RGS2P41220 211 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 KRT76Q01546 638 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 SEMA3FQ13275 785 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 ITGB3BPQ13352 177 aaPredicted RBP11.97□□□□□ -0.49
LEMD3-202ENST00000539442 IRF5Q13568 498 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 E2F4Q16254 413 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 HYIQ5T013 277 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 NCAPH2Q6IBW4 605 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 KRBA2Q6ZNG9 492 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 ARMCX2Q7L311 632 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 CNNM3Q8NE01 707 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 RASSF8Q8NHQ8 419 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 NEK9Q8TD19 979 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 USP6NLQ92738 828 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 GJA10Q969M2 543 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 MAML3Q96JK9 1138 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 NUDT12Q9BQG2 462 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 SDF4Q9BRK5 362 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 MMTAG2Q9BU76 263 aaKnown RBP11.97□□□□□ -0.49
LEMD3-202ENST00000539442 NT5C3AQ9H0P0 336 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 TNMDQ9H2S6 317 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 MAGEF1Q9HAY2 307 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 VTA1Q9NP79 307 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 RNF186Q9NXI6 227 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 SAGE1Q9NXZ1 904 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 HOOK1Q9UJC3 728 aaKnown RBP11.97□□□□□ -0.49
LEMD3-202ENST00000539442 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
LEMD3-202ENST00000539442 A0A087X0B3 334 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms