RNA–Protein interactions for RNA: ENST00000539318.5

NPIPB4-211, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5

Gene NPIPB4, Length 695 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-211	ENST00000539318	PDIA4	P13667	645 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	GCFC2	P16383	781 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	DDIT3	P35638	169 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	TRAPPC10	P48553	1259 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	KCNA10	Q16322	511 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	LETM2	Q2VYF4	491 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	HSDL1	Q3SXM5	330 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	PRR16	Q569H4	304 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	GNAS	Q5JWF2	1037 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	IFFO2	Q5TF58	517 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	METTL7B	Q6UX53	244 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	B3GNT9	Q6UX72	402 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	CYFIP1	Q7L576	1253 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	TLK2	Q86UE8	772 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	DHX37	Q8IY37	1157 aa	Known RBP	10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	SPRYD3	Q8NCJ5	442 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	ETNPPL	Q8TBG4	499 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	HAS1	Q92839	578 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	SLC5A5	Q92911	643 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	KCNMB3	Q9NPA1	279 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	TSHZ2	Q9NRE2	1034 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	ZDHHC9	Q9Y397	364 aa		10.15	□□□□□ -0.78
NPIPB4-211	ENST00000539318	KAT6A	Q92794	2004 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	TRIP12	Q14669	1992 aa	Predicted RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	TCHH	Q07283	1943 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	GSTTP1	A0A1W2PQM5	241 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	IPO5	O00410	1097 aa	Known RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	DNM1L	O00429	736 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	TBX3	O15119	743 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	CCNT1	O60563	726 aa	Known RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PSMD10	O75832	226 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	C6orf222	P0C671	652 aa	Predicted RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	RGS19	P49795	217 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	BEX3	Q00994	111 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SET	Q01105	290 aa	Predicted RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	REST	Q13127	1097 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PKP1	Q13835	747 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	FSCN1	Q16658	493 aa	Known RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	MCTP1	Q6DN14	999 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	RNF180	Q86T96	592 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	OR6J1	Q8NGC5	347 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PPTC7	Q8NI37	304 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	AFG1L	Q8WV93	481 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	FAM20A	Q96MK3	541 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	MTMR9	Q96QG7	549 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	GPR20	Q99678	358 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	NAP1L4	Q99733	375 aa	Known RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	AP5M1	Q9H0R1	490 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PHF24	Q9UPV7	400 aa		10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	RBM19	Q9Y4C8	960 aa	Known RBP	10.14	□□□□□ -0.79
NPIPB4-211	ENST00000539318	CCNE2	O96020	404 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ASGR1	P07306	291 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	HSP90AA1	P07900	732 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	MMP3	P08254	477 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ACLY	P53396	1101 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SOX10	P56693	466 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PURA	Q00577	322 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ORC2	Q13416	577 aa	Predicted RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	BRAP	Q7Z569	592 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PCSK9	Q8NBP7	692 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SP7	Q8TDD2	431 aa	Predicted RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	DIS3L	Q8TF46	1054 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	KAT2B	Q92831	832 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	GJA10	Q969M2	543 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PAWR	Q96IZ0	340 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SPATA33	Q96N06	139 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	UIMC1	Q96RL1	719 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	RIT2	Q99578	217 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ZNF577	Q9BSK1	485 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	C16orf70	Q9BSU1	422 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	TMEM60	Q9H2L4	133 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	MLXIP	Q9HAP2	919 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SPC25	Q9HBM1	224 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	TBC1D22B	Q9NU19	505 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	DDX25	Q9UHL0	483 aa	Known RBP	10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PCDHB6	Q9Y5E3	794 aa		10.13	□□□□□ -0.79
NPIPB4-211	ENST00000539318	GRIN2D	O15399	1336 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	IGKV6D-21	A0A0A0MT36	114 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	VPS37C	A5D8V6	355 aa	Predicted RBP	10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	MOXD2P	A6NHM9	499 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	HAS3	O00219	553 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	KPNA6	O60684	536 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	BRD1	O95696	1058 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ATP2B1	P20020	1258 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	CPT1A	P50416	773 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	CDK7	P50613	346 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SPIRE1	Q08AE8	756 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	GNL2	Q13823	731 aa	Known RBP	10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	NBR1	Q14596	966 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ZNF174	Q15697	407 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	RILPL1	Q5EBL4	403 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	TTC38	Q5R3I4	469 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ABHD15	Q6UXT9	468 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	FERMT3	Q86UX7	667 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SLC43A3	Q8NBI5	491 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	SEPT1	Q8WYJ6	367 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	PCYT2	Q99447	389 aa		10.12	□□□□□ -0.79
NPIPB4-211	ENST00000539318	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms