RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 BTG3Q14201 252 aaPredicted RBP14.12□□□□□ -0.15
YBX3-207ENST00000539204 ARHGEF16Q5VV41 709 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 SYTL5Q8TDW5 730 aaPredicted RBP14.12□□□□□ -0.15
YBX3-207ENST00000539204 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 TBC1D5Q92609 795 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 RMDN3Q96TC7 470 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 TMEM47Q9BQJ4 181 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 OSBPL7Q9BZF2 842 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 LRRCC1Q9C099 1032 aa14.12□□□□□ -0.15
YBX3-207ENST00000539204 COL4A6Q14031 1691 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 TREHO43280 583 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 HOXD8P13378 290 aaPredicted RBP14.11□□□□□ -0.15
YBX3-207ENST00000539204 NRIP1P48552 1158 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 PTPN21Q16825 1174 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 NAALADL2Q58DX5 795 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 MYSM1Q5VVJ2 828 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 ZBTB33Q86T24 672 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 RBM23Q86U06 439 aaKnown RBP14.11□□□□□ -0.15
YBX3-207ENST00000539204 NLRC5Q86WI3 1866 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 MCF2L2Q86YR7 1114 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 KMT2EQ8IZD2 1858 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 P2RX5Q93086 422 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 NKD2Q969F2 451 aaPredicted RBP14.11□□□□□ -0.15
YBX3-207ENST00000539204 SPATA33Q96N06 139 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 C16orf70Q9BSU1 422 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 RNPEPQ9H4A4 650 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 ADGRA3Q8IWK6 1321 aa14.11□□□□□ -0.15
YBX3-207ENST00000539204 H3BRB1 525 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 PDGFBP01127 241 aaPredicted RBP14.1□□□□□ -0.15
YBX3-207ENST00000539204 PDHBP11177 359 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 GNAT1P11488 350 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 ATF7P17544 494 aaPredicted RBP14.1□□□□□ -0.15
YBX3-207ENST00000539204 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 KCNV1Q6PIU1 500 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 ADSSL1Q8N142 457 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 SPPL3Q8TCT6 385 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 SEC62Q99442 399 aaKnown RBP14.1□□□□□ -0.15
YBX3-207ENST00000539204 TUT1Q9H6E5 874 aaKnown RBP14.1□□□□□ -0.15
YBX3-207ENST00000539204 BARX2Q9UMQ3 279 aaPredicted RBP14.1□□□□□ -0.15
YBX3-207ENST00000539204 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
YBX3-207ENST00000539204 ENPP3O14638 875 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 SMARCA5O60264 1052 aaPredicted RBP14.09□□□□□ -0.15
YBX3-207ENST00000539204 NR3C2P08235 984 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 SMIM10L2AP0DMW4 78 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 SMIM10L2BP0DMW5 78 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 EIF2AK2P19525 551 aaKnown RBP14.09□□□□□ -0.15
YBX3-207ENST00000539204 DNAJB1P25685 340 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 ZNF543Q08ER8 600 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 CELF3Q5SZQ8 465 aaKnown RBP14.09□□□□□ -0.15
YBX3-207ENST00000539204 ADGRD2Q7Z7M1 963 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 ZNF689Q96CS4 500 aaPredicted RBP14.09□□□□□ -0.15
YBX3-207ENST00000539204 TOMM22Q9NS69 142 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 TCP11L1Q9NUJ3 509 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 COL20A1Q9P218 1284 aa14.09□□□□□ -0.15
YBX3-207ENST00000539204 VPS13AQ96RL7 3174 aa14.08□□□□□ -0.15
YBX3-207ENST00000539204 PLXNA3P51805 1871 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 ORC4O43929 436 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 SORBS3O60504 671 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 ITGB1P05556 798 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 HOXC8P31273 242 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 FAM26DQ5JW98 314 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 MCTP2Q6DN12 878 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 FRMD5Q7Z6J6 570 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 MICAL1Q8TDZ2 1067 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 POF1BQ8WVV4 589 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 GPATCH3Q96I76 525 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 TLE6Q9H808 572 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 MLXIPQ9HAP2 919 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 RC3H2Q9HBD1 1191 aaKnown RBP14.08□□□□□ -0.16
YBX3-207ENST00000539204 SETD4Q9NVD3 440 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 ABCB11O95342 1321 aa14.08□□□□□ -0.16
YBX3-207ENST00000539204 DNAH14Q0VDD8 3507 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 DGKIO75912 1065 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 GGPS1O95749 300 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 GLP2RO95838 553 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 TGFB3P10600 412 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 HSPD1P10809 573 aaKnown RBP14.07□□□□□ -0.16
YBX3-207ENST00000539204 MS4A1P11836 297 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 KLHL23Q8NBE8 558 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 SUSD6Q92537 303 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 TTC14Q96N46 770 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 UBA5Q9GZZ9 404 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 ZBTB40Q9NUA8 1239 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 ANAPC4Q9UJX5 808 aa14.07□□□□□ -0.16
YBX3-207ENST00000539204 FGRP09769 529 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 SNHG28P0DPA3 235 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 MYCLP12524 364 aaPredicted RBP14.06□□□□□ -0.16
YBX3-207ENST00000539204 SP2Q02086 613 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 RRP12Q5JTH9 1297 aaKnown RBP14.06□□□□□ -0.16
YBX3-207ENST00000539204 GPATCH4Q5T3I0 446 aaKnown RBP14.06□□□□□ -0.16
YBX3-207ENST00000539204 UBALD2Q8IYN6 164 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
YBX3-207ENST00000539204 MRPL42Q9Y6G3 142 aaKnown RBP14.06□□□□□ -0.16
YBX3-207ENST00000539204 WDR87Q6ZQQ6 2873 aa14.06□□□□□ -0.16
YBX3-207ENST00000539204 MYH7BA7E2Y1 1941 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 PER2O15055 1255 aa14.05□□□□□ -0.16
YBX3-207ENST00000539204 PPFIA3O75145 1194 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms