RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SERPINB13Q9UIV8 391 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 GIT1Q9Y2X7 761 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PCDHB12Q9Y5F1 795 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 RASSF10A6NK89 507 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TGM5O43548 720 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 IGLV1-40P01703 118 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TMEM253P0C7T8 217 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 RBP3P10745 1247 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 AMPD1P23109 780 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 FPR2P25090 351 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 DDIT3P35638 169 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 BCAR1P56945 870 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ERVK-21P61565 698 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 GPSM2P81274 684 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 HTRA3P83110 453 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 NFATC3Q12968 1075 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 NFE2Q16621 373 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TIGD5Q53EQ6 642 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TRAPPC3LQ5T215 181 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 MROH9Q5TGP6 573 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 WWC2Q6AWC2 1192 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 ARMC6Q6NXE6 501 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 TSPYL5Q86VY4 417 aaPredicted RBP1.42□□□□□ -2.18
HIF1A-204ENST00000539097 KRT78Q8N1N4 520 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 EFHBQ8N7U6 833 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 AGBL5Q8NDL9 886 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 OR2W6PQ8NHA6 318 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 SH3RF2Q8TEC5 729 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 YIPF4Q9BSR8 244 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 CSRNP2Q9H175 543 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PRDM10Q9NQV6 1147 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 AP5S1Q9NUS5 200 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 PLAGL2Q9UPG8 496 aa1.42□□□□□ -2.18
HIF1A-204ENST00000539097 FITM1A5D6W6 292 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GOLGA6CA6NDK9 693 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GOLGA6BA6NDN3 693 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CBX4O00257 560 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ADAMTS4O75173 837 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GOLGA6DP0CG33 693 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TPP2P29144 1249 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 HOXA10P31260 410 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 MCM2P49736 904 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ADKP55263 362 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ERVFRD-1P60508 538 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 YBX1P67809 324 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NFKB2Q00653 900 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DGKKQ5KSL6 1271 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CPZQ66K79 652 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FRMD7Q6ZUT3 714 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DDX46Q7L014 1031 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 KANSL1Q7Z3B3 1105 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FERMT3Q86UX7 667 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CD163Q86VB7 1156 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 MORC1Q86VD1 984 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CERS3Q8IU89 383 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CLRN3Q8NCR9 226 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 RCBTB1Q8NDN9 531 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ASB11Q8WXH4 323 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 SEC14L1Q92503 715 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 RTF1Q92541 710 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PMM1Q92871 262 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TTC17Q96AE7 1141 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FOXB1Q99853 325 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DUSP15Q9H1R2 295 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 BSDC1Q9NW68 430 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GOLGA6AQ9NYA3 693 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DDX20Q9UHI6 824 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TRHDEQ9UKU6 1024 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NOB1Q9ULX3 412 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 IRS2Q9Y4H2 1338 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 WDR64B1ANS9 1081 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FGF10O15520 208 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GPR39O43194 453 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PRKD3O94806 890 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FBXO21O94952 628 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 F2P00734 622 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 LTFP02788 710 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 RPLP2P05387 115 aaKnown RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 BMP3P12645 472 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 GLB1P16278 677 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 JUNBP17275 347 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CD40P25942 277 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 ANAPC15P60006 121 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 TCF15Q12870 199 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 NUTM2GQ5VZR2 741 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PPP4R3AQ6IN85 833 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CYB5RLQ6IPT4 315 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 UNQ6494/PRO21346Q6UXR6 183 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DPP8Q6V1X1 898 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 RASSF3Q86WH2 238 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 DTX1Q86Y01 620 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CPNE8Q86YQ8 564 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 SPACA3Q8IXA5 215 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CNTD1Q8N815 330 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 BRI3BPQ8WY22 251 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 CHMP4CQ96CF2 233 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 EID2BQ96D98 161 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 FCRL2Q96LA5 508 aaPredicted RBP1.41□□□□□ -2.18
HIF1A-204ENST00000539097 RRAGCQ9HB90 399 aa1.41□□□□□ -2.18
HIF1A-204ENST00000539097 PRDM7Q9NQW5 492 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms