RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 GJC2Q5T442 439 aaPredicted RBP26.54■■□□□ 1.84
TMEM260-202ENST00000538838 ARL6IP4Q66PJ3 421 aaKnown RBP26.54■■□□□ 1.84
TMEM260-202ENST00000538838 SH3TC2Q8TF17 1288 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 COPS5Q92905 334 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 TTC12Q9H892 705 aaPredicted RBP26.54■■□□□ 1.84
TMEM260-202ENST00000538838 MORC2Q9Y6X9 1032 aaPredicted RBP26.54■■□□□ 1.84
TMEM260-202ENST00000538838 VWA3AA6NCI4 1184 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 DHX15O43143 795 aaKnown RBP26.54■■□□□ 1.84
TMEM260-202ENST00000538838 PPP6R2O75170 966 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 PSMD10O75832 226 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 GRIN1Q05586 938 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 SENP7Q9BQF6 1050 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 VAV3Q9UKW4 847 aa26.54■■□□□ 1.84
TMEM260-202ENST00000538838 FRMPD3Q5JV73 1810 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 GGPS1O95749 300 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 SMPD1P17405 629 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 ME1P48163 572 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 MAP3K21Q5TCX8 1036 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 DTHD1Q6ZMT9 781 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 LENG1Q96BZ8 264 aaPredicted RBP26.53■■□□□ 1.84
TMEM260-202ENST00000538838 GBP4Q96PP9 640 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 RIT2Q99578 217 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 SDF4Q9BRK5 362 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 TEKT3Q9BXF9 490 aa26.53■■□□□ 1.84
TMEM260-202ENST00000538838 NFASCO94856 1347 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 CCND3P30281 292 aaPredicted RBP26.52■■□□□ 1.84
TMEM260-202ENST00000538838 TECP42680 631 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 IQSEC1Q6DN90 963 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 CYFIP1Q7L576 1253 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 KRI1Q8N9T8 703 aaKnown RBP26.52■■□□□ 1.84
TMEM260-202ENST00000538838 TBC1D22BQ9NU19 505 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 PCDHA12Q9UN75 941 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 SRPRBQ9Y5M8 271 aaKnown RBP26.52■■□□□ 1.84
TMEM260-202ENST00000538838 WDR81Q562E7 1941 aa26.52■■□□□ 1.84
TMEM260-202ENST00000538838 POTEMA6NI47 508 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 CNGA1P29973 690 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 TNFAIP2Q03169 654 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 NEDD9Q14511 834 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 TMEM266Q2M3C6 531 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 DUSP28Q4G0W2 176 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 FERMT2Q96AC1 680 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 CLIC6Q96NY7 704 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 UNC45AQ9H3U1 944 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 FAM184BQ9ULE4 1060 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 PCDHA7Q9UN72 937 aa26.51■■□□□ 1.83
TMEM260-202ENST00000538838 CHMP2AO43633 222 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 FARP2O94887 1054 aaPredicted RBP26.5■■□□□ 1.83
TMEM260-202ENST00000538838 AKR1A1P14550 325 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 FXR2P51116 673 aaKnown RBP eCLIP26.5■■□□□ 1.83
TMEM260-202ENST00000538838 SP4Q02446 784 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 SPIRE1Q08AE8 756 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 SLC9C1Q4G0N8 1177 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 JPH1Q9HDC5 661 aaPredicted RBP26.5■■□□□ 1.83
TMEM260-202ENST00000538838 TELO2Q9Y4R8 837 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 FBXO46Q6PJ61 603 aaPredicted RBP26.5■■□□□ 1.83
TMEM260-202ENST00000538838 GIMAP8Q8ND71 665 aaPredicted RBP26.5■■□□□ 1.83
TMEM260-202ENST00000538838 CSRNP2Q9H175 543 aa26.5■■□□□ 1.83
TMEM260-202ENST00000538838 ELP1O95163 1332 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 ARHGAP1Q07960 439 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 PPP2R5CQ13362 524 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 CELF3Q5SZQ8 465 aaKnown RBP26.49■■□□□ 1.83
TMEM260-202ENST00000538838 NCAPH2Q6IBW4 605 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 METTL7BQ6UX53 244 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 DHX37Q8IY37 1157 aaKnown RBP26.49■■□□□ 1.83
TMEM260-202ENST00000538838 MLXIPQ9HAP2 919 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 SLC9A2Q9UBY0 812 aa26.49■■□□□ 1.83
TMEM260-202ENST00000538838 SEPT4O43236 478 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 CCNE2O96020 404 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 TPRNQ4KMQ1 711 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 AXDND1Q5T1B0 1012 aaPredicted RBP26.48■■□□□ 1.83
TMEM260-202ENST00000538838 B3GNT9Q6UX72 402 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 IGSF22Q8N9C0 903 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 TMEM87AQ8NBN3 555 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 PRDM10Q9NQV6 1147 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 TCEAL9Q9UHQ7 104 aa26.48■■□□□ 1.83
TMEM260-202ENST00000538838 GNEQ9Y223 722 aaKnown RBP26.48■■□□□ 1.83
TMEM260-202ENST00000538838 PP2D1A8MPX8 630 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 NKRFO15226 690 aaKnown RBP eCLIP26.47■■□□□ 1.83
TMEM260-202ENST00000538838 CUTAO60888 179 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 GH1P01241 217 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 KRT76Q01546 638 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 CSPP1Q1MSJ5 1256 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 SPECC1Q5M775 1068 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 EML1O00423 815 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 PKN2Q16513 984 aaKnown RBP26.47■■□□□ 1.83
TMEM260-202ENST00000538838 OR6J1Q8NGC5 347 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 RAB34Q9BZG1 259 aa26.47■■□□□ 1.83
TMEM260-202ENST00000538838 LONP1P36776 959 aaKnown RBP26.46■■□□□ 1.83
TMEM260-202ENST00000538838 ZNF746Q6NUN9 644 aaPredicted RBP26.46■■□□□ 1.83
TMEM260-202ENST00000538838 TLK2Q86UE8 772 aa26.46■■□□□ 1.83
TMEM260-202ENST00000538838 SPATA33Q96N06 139 aa26.46■■□□□ 1.83
TMEM260-202ENST00000538838 LRWD1Q9UFC0 647 aa26.46■■□□□ 1.83
TMEM260-202ENST00000538838 POTEFA5A3E0 1075 aa26.45■■□□□ 1.82
TMEM260-202ENST00000538838 CDC25AP30304 524 aa26.45■■□□□ 1.82
TMEM260-202ENST00000538838 ACTR2P61160 394 aa26.45■■□□□ 1.82
TMEM260-202ENST00000538838 HSDL1Q3SXM5 330 aa26.45■■□□□ 1.82
TMEM260-202ENST00000538838 HMX1Q9NP08 348 aaPredicted RBP26.45■■□□□ 1.82
TMEM260-202ENST00000538838 SAMM50Q9Y512 469 aa26.45■■□□□ 1.82
TMEM260-202ENST00000538838 PDIA5Q14554 519 aa26.44■■□□□ 1.82
TMEM260-202ENST00000538838 SHC4Q6S5L8 630 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms