RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 GPRASP2Q96D09 838 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 EPSTI1Q96J88 318 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 ZNF333Q96JL9 665 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 AGO4Q9HCK5 861 aaKnown RBP15.93■□□□□ 0.14
CD4-208ENST00000538827 KCNH7Q9NS40 1196 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 SLC5A4Q9NY91 659 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
CD4-208ENST00000538827 ASB14A6NK59 587 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 KINO60870 393 aaKnown RBP15.92■□□□□ 0.14
CD4-208ENST00000538827 NR1I2O75469 434 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 CDC25AP30304 524 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 SYKP43405 635 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 MAP2K5Q13163 448 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 ARMCX2Q7L311 632 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 CABP7Q86V35 215 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 FBXO16Q8IX29 292 aaPredicted RBP15.92■□□□□ 0.14
CD4-208ENST00000538827 PDILTQ8N807 584 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 NPLOC4Q8TAT6 608 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 CD99L2Q8TCZ2 262 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 SNX29Q8TEQ0 813 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 AK8Q96MA6 479 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 INPP4AQ96PE3 977 aaPredicted RBP15.92■□□□□ 0.14
CD4-208ENST00000538827 NUDT12Q9BQG2 462 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 ARHGAP39Q9C0H5 1083 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 DACT1Q9NYF0 836 aa15.92■□□□□ 0.14
CD4-208ENST00000538827 IPO5O00410 1097 aaKnown RBP15.91■□□□□ 0.14
CD4-208ENST00000538827 SORBS3O60504 671 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 EIF3JO75822 258 aaKnown RBP15.91■□□□□ 0.14
CD4-208ENST00000538827 CYP2B6P20813 491 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 RGS2P41220 211 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 UBA7P41226 1012 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 PSMC4P43686 418 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 LACTBP83111 547 aaPredicted RBP15.91■□□□□ 0.14
CD4-208ENST00000538827 KARSQ15046 597 aaKnown RBP15.91■□□□□ 0.14
CD4-208ENST00000538827 MORN1Q5T089 497 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 DHX58Q96C10 678 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 CDK5RAP3Q96JB5 506 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 MAML3Q96JK9 1138 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 CDHR1Q96JP9 859 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 APBA2Q99767 749 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 SDF4Q9BRK5 362 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 GZF1Q9H116 711 aaPredicted RBP15.91■□□□□ 0.14
CD4-208ENST00000538827 DDX19AQ9NUU7 478 aaKnown RBP15.91■□□□□ 0.14
CD4-208ENST00000538827 VAV3Q9UKW4 847 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 KCNH3Q9ULD8 1083 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 COL6A3P12111 3177 aa15.91■□□□□ 0.14
CD4-208ENST00000538827 RANBP2P49792 3224 aaKnown RBP15.9■□□□□ 0.14
CD4-208ENST00000538827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.9■□□□□ 0.14
CD4-208ENST00000538827 CTGFP29279 349 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 SP3Q02447 781 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 SEMA3FQ13275 785 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 ITGB3BPQ13352 177 aaPredicted RBP15.9■□□□□ 0.14
CD4-208ENST00000538827 CCDC183Q5T5S1 534 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 KRT79Q5XKE5 535 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 FMR1NBQ8N0W7 255 aaPredicted RBP15.9■□□□□ 0.14
CD4-208ENST00000538827 IGSF22Q8N9C0 903 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 CALML4Q96GE6 196 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 PLIN2Q99541 437 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 PANK2Q9BZ23 570 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 NUP62CLQ9H1M0 184 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 UNC45AQ9H3U1 944 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.9■□□□□ 0.14
CD4-208ENST00000538827 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 HPSEQ9Y251 543 aa15.9■□□□□ 0.14
CD4-208ENST00000538827 A0A087X0B3 334 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 LOC102724159A0A0B4J2E5 919 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 POLR2DO15514 142 aaKnown RBP15.89■□□□□ 0.13
CD4-208ENST00000538827 PSMD10O75832 226 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 RGS20O76081 388 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 CCT6AP40227 531 aaKnown RBP15.89■□□□□ 0.13
CD4-208ENST00000538827 STAT6P42226 847 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 SP4Q02446 784 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 PWP2Q15269 919 aaKnown RBP15.89■□□□□ 0.13
CD4-208ENST00000538827 SLC9C1Q4G0N8 1177 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 HAUS3Q68CZ6 603 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 MIER3Q7Z3K6 550 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 ZNF467Q7Z7K2 595 aaPredicted RBP15.89■□□□□ 0.13
CD4-208ENST00000538827 ERMNQ8TAM6 284 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 TRIM47Q96LD4 638 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 RIT2Q99578 217 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 CLSTN2Q9H4D0 955 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 ZHX1Q9UKY1 873 aaPredicted RBP15.89■□□□□ 0.13
CD4-208ENST00000538827 DIS3Q9Y2L1 958 aaKnown RBP15.89■□□□□ 0.13
CD4-208ENST00000538827 KDM3AQ9Y4C1 1321 aa15.89■□□□□ 0.13
CD4-208ENST00000538827 FAM237AA0A1B0GTK4 181 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 ATP9AO75110 1047 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 ZNF202O95125 648 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 KCNA2P16389 499 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 ICAM3P32942 547 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 SPIRE1Q08AE8 756 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 PPP2R5CQ13362 524 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 CEP57L1Q8IYX8 460 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 ENGASEQ8NFI3 743 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 MORC4Q8TE76 937 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 CCSER1Q9C0I3 900 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 VTA1Q9NP79 307 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 DISC1Q9NRI5 854 aa15.88■□□□□ 0.13
CD4-208ENST00000538827 TBC1D22BQ9NU19 505 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms