RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 TRIM28Q13263 835 aaKnown RBP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 NAA25Q14CX7 972 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 TOMM20Q15388 145 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 C11orf91Q3C1V1 193 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 LDHAL6AQ6ZMR3 332 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 RASSF8Q8NHQ8 419 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 CASKIN2Q8WXE0 1202 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 PSMB7Q99436 277 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 ARPC5LQ9BPX5 153 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 PPP1R12CQ9BZL4 782 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 CNOT10Q9H9A5 744 aaKnown RBP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 LEMD3Q9Y2U8 911 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 V9GY48 417 aaPredicted RBP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 SSU72P8A0A1W2PR75 194 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 CES2O00748 559 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 WNT7AO00755 349 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 FGFR1OPO95684 399 aaKnown RBP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 SSBP05455 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 GSTA1P08263 222 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 MCM7P33993 719 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 KLK7P49862 253 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 FUT2Q10981 343 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 RIPK1Q13546 671 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 SEC23AQ15436 765 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 ODF2Q5BJF6 829 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 MIIPQ5JXC2 388 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 ANKS4BQ8N8V4 417 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 TATDN2Q93075 761 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 HVCN1Q96D96 273 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 SHISA4Q96DD7 197 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 NUCKS1Q9H1E3 243 aaKnown RBP9.91□□□□□ -0.82
SNHG1-209ENST00000538654 ISCUQ9H1K1 167 aa9.91□□□□□ -0.82
SNHG1-209ENST00000538654 TNKSO95271 1327 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 ABCB11O95342 1321 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 NCK2O43639 380 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 KLRC4O43908 158 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 PLEKP08567 350 aaPredicted RBP9.9□□□□□ -0.82
SNHG1-209ENST00000538654 FAM163BP0C2L3 166 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 E2F5Q15329 346 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 ODR4Q5SWX8 454 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 CPLX4Q7Z7G2 160 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 MAGEB6Q8N7X4 407 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 ARMC2Q8NEN0 867 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 CUL5Q93034 780 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 KRT12Q99456 494 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 IER2Q9BTL4 223 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 MFRPQ9BY79 579 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 ARMT1Q9H993 441 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 CNNM1Q9NRU3 951 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 RYDENQ9NUL5 291 aaKnown RBP9.9□□□□□ -0.82
SNHG1-209ENST00000538654 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 SMARCAL1Q9NZC9 954 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 EHD2Q9NZN4 543 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 SLAIN2Q9P270 581 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 TACC3Q9Y6A5 838 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 BCORQ6W2J9 1755 aa9.9□□□□□ -0.82
SNHG1-209ENST00000538654 BUB1BO60566 1050 aaPredicted RBP9.9□□□□□ -0.83
SNHG1-209ENST00000538654 PRDM1O75626 825 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 ATP6V1G2O95670 118 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 CALML3P27482 149 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 SARNPP82979 210 aaKnown RBP9.9□□□□□ -0.83
SNHG1-209ENST00000538654 ICA1Q05084 483 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 IL17AQ16552 155 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 PIK3AP1Q6ZUJ8 805 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 CCT6BQ92526 530 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 CAPN10Q9HC96 672 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 KBTBD4Q9NVX7 518 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 SLC4A4Q9Y6R1 1079 aa9.9□□□□□ -0.83
SNHG1-209ENST00000538654 ESYT3A0FGR9 886 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 CFAP73A6NFT4 308 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 RBAK-RBAKDNI3L0D1 243 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 ORC4O43929 436 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 DDAH1O94760 285 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 MYBP10242 640 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 CTNNA1P35221 906 aaKnown RBP9.89□□□□□ -0.83
SNHG1-209ENST00000538654 HSD17B3P37058 310 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 UBA7P41226 1012 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 NLRP5P59047 1200 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 ELF3P78545 371 aaPredicted RBP9.89□□□□□ -0.83
SNHG1-209ENST00000538654 HLTFQ14527 1009 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNHG1-209ENST00000538654 NPY5RQ15761 445 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 NBPF20Q3BBV1 942 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 VWA3BQ502W6 1294 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 COBLL1Q53SF7 1204 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 C1QTNF12Q5T7M4 302 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 PPP1R18Q6NYC8 613 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 DTHD1Q6ZMT9 781 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 CENPTQ96BT3 561 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 MS4A14Q96JA4 679 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 TINF2Q9BSI4 451 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 CCSER1Q9C0I3 900 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 EBF2Q9HAK2 575 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 NOD2Q9HC29 1040 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 PDE8BO95263 885 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 PYGBP11216 843 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 HOXA7P31268 230 aaPredicted RBP9.89□□□□□ -0.83
SNHG1-209ENST00000538654 GRIK3Q13003 919 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 ANKRD40Q6AI12 368 aa9.89□□□□□ -0.83
SNHG1-209ENST00000538654 ZBTB38Q8NAP3 1195 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms