RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 H3BRB1 525 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 SLC27A2O14975 620 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 NBNO60934 754 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 LGR5O75473 907 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 GNAT1P11488 350 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 MRPS5P82675 430 aaKnown RBP9.96□□□□□ -0.82
DDB1-212ENST00000538470 MRPS9P82933 396 aaKnown RBP9.96□□□□□ -0.82
DDB1-212ENST00000538470 SEMA3FQ13275 785 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 IKBKEQ14164 716 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 ZNF618Q5T7W0 954 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 NFXL1Q6ZNB6 911 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 NLRX1Q86UT6 975 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 PPM1EQ8WY54 764 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 GPKOWQ92917 476 aaPredicted RBP eCLIP9.96□□□□□ -0.82
DDB1-212ENST00000538470 GPRASP2Q96D09 838 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 CDHR1Q96JP9 859 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 ASB2Q96Q27 587 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 MYL10Q9BUA6 226 aa9.96□□□□□ -0.82
DDB1-212ENST00000538470 TUT1Q9H6E5 874 aaKnown RBP9.96□□□□□ -0.82
DDB1-212ENST00000538470 MUC3AQ02505 3323 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 MEIS2O14770 477 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 SORBS3O60504 671 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 GJB5O95377 273 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 SMIM10L2AP0DMW4 78 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 SMIM10L2BP0DMW5 78 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 AAK1Q2M2I8 961 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 BMP2KLQ5H9B9 411 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 RNF20Q5VTR2 975 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 CREB3L3Q68CJ9 461 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 SGMS1Q86VZ5 419 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 PIBF1Q8WXW3 757 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 ARNTL2Q8WYA1 636 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 ATP6V0A1Q93050 837 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 WNT8BQ93098 351 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 GPR20Q99678 358 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 ZBED2Q9BTP6 218 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 EHMT1Q9H9B1 1298 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 ANO2Q9NQ90 1003 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 PRDM6Q9NQX0 595 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 LMCD1Q9NZU5 365 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 SLC12A7Q9Y666 1083 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 MTCH2Q9Y6C9 303 aa9.95□□□□□ -0.82
DDB1-212ENST00000538470 TCF20Q9UGU0 1960 aaKnown RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 EPOPA6NHQ4 379 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 RSPH10B2B2RC85 870 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 hCG_1984214I3L0E3 225 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 TNFRSF10AO00220 468 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 PLEKHA8P1O95397 391 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 RSPH10BP0C881 870 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 THPOP40225 353 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 DEFB103AP81534 67 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 ZNF200P98182 395 aaPredicted RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 MKRN4PQ13434 485 aaPredicted RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 HIC1Q14526 733 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 MBTPS1Q14703 1052 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 NECTIN1Q15223 517 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 CCDC85BQ15834 202 aaPredicted RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 PPP1R18Q6NYC8 613 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 USP17L6PQ6QN14 398 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 TMTC3Q6ZXV5 915 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 CENPQQ7L2Z9 268 aaPredicted RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 CYFIP1Q7L576 1253 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 MICALL1Q8N3F8 863 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 SRBD1Q8N5C6 995 aaKnown RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 ZNF713Q8N859 430 aaPredicted RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 RAD9AQ99638 391 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 PSTPIP2Q9H939 334 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 RBM28Q9NW13 759 aaKnown RBP9.94□□□□□ -0.82
DDB1-212ENST00000538470 COG5Q9UP83 839 aa9.94□□□□□ -0.82
DDB1-212ENST00000538470 CNTNAP5Q8WYK1 1306 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 NRCAMQ92823 1304 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 SPDYE3A6NKU9 549 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 TREHO43280 583 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 ARHGEF15O94989 841 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 AMHP03971 560 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 KCNA2P16389 499 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 ERVK-21P61565 698 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 GRB10Q13322 594 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 PLEKHG4Q58EX7 1191 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 APOA5Q6Q788 366 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 SYNE3Q6ZMZ3 975 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 MICU3Q86XE3 530 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 TRIM50Q86XT4 487 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 ADAMTS19Q8TE59 1207 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 SEPT8Q92599 483 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 APBB2Q92870 758 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 ZFP91Q96JP5 570 aaPredicted RBP9.93□□□□□ -0.82
DDB1-212ENST00000538470 TGS1Q96RS0 853 aaKnown RBP9.93□□□□□ -0.82
DDB1-212ENST00000538470 UHRF1Q96T88 793 aaPredicted RBP9.93□□□□□ -0.82
DDB1-212ENST00000538470 RNPEPQ9H4A4 650 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 CERS4Q9HA82 394 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 RTEL1Q9NZ71 1219 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 INSL6Q9Y581 213 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 REV3LO60673 3130 aa9.93□□□□□ -0.82
DDB1-212ENST00000538470 ATG2AQ2TAZ0 1938 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 LOXHD1Q8IVV2 1947 aa9.92□□□□□ -0.82
DDB1-212ENST00000538470 LCHNA4D1U4 455 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms