RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 K7ERI5 159 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 POLR2BP30876 1174 aaKnown RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 HPDP32754 393 aaPredicted RBP5.85□□□□□ -1.47
LRP6-203ENST00000538239 STAT3P40763 770 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 PRELPP51888 382 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 SNAPC2Q13487 334 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 SWSAP1Q6NVH7 229 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 URGCPQ8TCY9 931 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 MAGEF1Q9HAY2 307 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 ATP6V0A4Q9HBG4 840 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 DIP2BQ9P265 1576 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 MED14O60244 1454 aa5.85□□□□□ -1.47
LRP6-203ENST00000538239 AFPP02771 609 aaKnown RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 TUBB4AP04350 444 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 CCDC6Q16204 474 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 BCORL1Q5H9F3 1711 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 ELMSAN1Q6PJG2 1045 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 PDZD4Q76G19 769 aaPredicted RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 COL23A1Q86Y22 540 aaPredicted RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 GANCQ8TET4 914 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 DDX23Q9BUQ8 820 aaKnown RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 CCDC94Q9BW85 323 aaPredicted RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 FANCLQ9NW38 375 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 NKIRAS1Q9NYS0 192 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 VPS18Q9P253 973 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 KCNK3O14649 394 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 BNIP3LO60238 219 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 RNF8O76064 485 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 LARGE1O95461 756 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 VPS41P49754 854 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 RASSF7Q02833 373 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 TMTC3Q6ZXV5 915 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 DGKHQ86XP1 1220 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 CUEDC2Q9H467 287 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 IMPACTQ9P2X3 320 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 ATP5DP30049 168 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 EVCP57679 992 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 CUL4BQ13620 913 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 C9orf131Q5VYM1 1079 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 CAPN12Q6ZSI9 719 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 ELMOD1Q8N336 334 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 OR6B3Q8NGW1 331 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 DYDC2Q96IM9 177 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 MTRQ99707 1265 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 LRRC4Q9HBW1 653 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 UBE2TQ9NPD8 197 aaPredicted RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 KBTBD13C9JR72 458 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 CYP2B6P20813 491 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 SAT1P21673 171 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 AP3B2Q13367 1082 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 PTPN21Q16825 1174 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 RINT1Q6NUQ1 792 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 TICAM2Q86XR7 235 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 MAIP1Q8WWC4 291 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 DAGLAQ9Y4D2 1042 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 LMTK2Q8IWU2 1503 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 H7C0C1 242 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 IFNAR1P17181 557 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 ATP5OP48047 213 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 SLC39A14Q15043 492 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 PALM2Q8IXS6 379 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 ZNF34Q8IZ26 560 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 SIX6OS1Q8N1H7 587 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 ENAHQ8N8S7 591 aaPredicted RBP5.84□□□□□ -1.47
LRP6-203ENST00000538239 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 POLD4Q9HCU8 107 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 SLC12A6Q9UHW9 1150 aa5.84□□□□□ -1.47
LRP6-203ENST00000538239 KIDINS220Q9ULH0 1771 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 CDC42EP5Q6NZY7 148 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 C17orf53Q8N3J3 647 aaPredicted RBP5.84□□□□□ -1.48
LRP6-203ENST00000538239 ANKS4BQ8N8V4 417 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 DESI2Q9BSY9 194 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 SH3GLB2Q9NR46 395 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 EMILIN3Q9NT22 766 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 GABBR1Q9UBS5 961 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 HERC5Q9UII4 1024 aaKnown RBP5.84□□□□□ -1.48
LRP6-203ENST00000538239 CPS1P31327 1500 aa5.84□□□□□ -1.48
LRP6-203ENST00000538239 COPB1P53618 953 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 PRPSAP1Q14558 356 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 SPATA1Q5VX52 437 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 OR6B2Q6IFH4 312 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 SRGAP1Q7Z6B7 1085 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 VPS52Q8N1B4 723 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 THEM5Q8N1Q8 247 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 PRPF38AQ8NAV1 312 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 P2RX5Q93086 422 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 KRT12Q99456 494 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.83□□□□□ -1.48
LRP6-203ENST00000538239 PTPRUQ92729 1446 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CCL15-CCL14A0A0B4J2E2 113 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 POTEMA6NI47 508 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 RIOK3O14730 519 aaKnown RBP5.83□□□□□ -1.48
LRP6-203ENST00000538239 LMNB1P20700 586 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 MESDQ14696 234 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 PLCB4Q15147 1175 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CCL15Q16663 113 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CFAP221Q4G0U5 840 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CPLX4Q7Z7G2 160 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 CTAGE3PQ8IX95 158 aa5.83□□□□□ -1.48
LRP6-203ENST00000538239 IFT20Q8IY31 132 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms