RNA–Protein interactions for RNA: ENST00000538073.5

CIT-209, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-209ENST00000538073 C4orf32Q8N8J7 132 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 ETNPPLQ8TBG4 499 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 SCFD2Q8WU76 684 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 CDHR1Q96JP9 859 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 PDGFCQ9NRA1 345 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 DDX25Q9UHL0 483 aaKnown RBP9.11□□□□□ -0.95
CIT-209ENST00000538073 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
CIT-209ENST00000538073 ATP6V1DQ9Y5K8 247 aa9.11□□□□□ -0.95
CIT-209ENST00000538073 MORC2Q9Y6X9 1032 aaPredicted RBP9.11□□□□□ -0.95
CIT-209ENST00000538073 HTTP42858 3142 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.1□□□□□ -0.95
CIT-209ENST00000538073 LAD1O00515 517 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 TBX3O15119 743 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 MSH4O15457 936 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ADCY6O43306 1168 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 NEMFO60524 1076 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ATP9AO75110 1047 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ARIH2O95376 493 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 INHAP05111 366 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 KCNA2P16389 499 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ATP2B1P20020 1258 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 MCM7P33993 719 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ADCYAP1R1P41586 468 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 NASPP49321 788 aaPredicted RBP9.1□□□□□ -0.95
CIT-209ENST00000538073 SP2Q02086 613 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 TTLL4Q14679 1199 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ZNF174Q15697 407 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 CCDC144BQ3MJ40 725 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 SLC9C1Q4G0N8 1177 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 DUSP28Q4G0W2 176 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ANO1Q5XXA6 986 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 IQSEC1Q6DN90 963 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 HAS1Q92839 578 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 SLC5A5Q92911 643 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ZNF396Q96N95 335 aaPredicted RBP9.1□□□□□ -0.95
CIT-209ENST00000538073 MTMR9Q96QG7 549 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 USP28Q96RU2 1077 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 AGO4Q9HCK5 861 aaKnown RBP9.1□□□□□ -0.95
CIT-209ENST00000538073 POLR3EQ9NVU0 708 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 ZHX1Q9UKY1 873 aaPredicted RBP9.1□□□□□ -0.95
CIT-209ENST00000538073 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 MRVI1Q9Y6F6 885 aa9.1□□□□□ -0.95
CIT-209ENST00000538073 NFASCO94856 1347 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 DOCK5Q9H7D0 1870 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 IPO5O00410 1097 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 NKRFO15226 690 aaKnown RBP eCLIP9.09□□□□□ -0.95
CIT-209ENST00000538073 DHX15O43143 795 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 SEPT4O43236 478 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 PSMD10O75832 226 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 BMP15O95972 392 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 TXNP10599 105 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 AKR1A1P14550 325 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 SMPD1P17405 629 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 UBA1P22314 1058 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 CCND3P30281 292 aaPredicted RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 PRPHP41219 470 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 ATP2C1P98194 919 aaPredicted RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 TNFAIP2Q03169 654 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 PTGDRQ13258 359 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 ITGB3BPQ13352 177 aaPredicted RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 NEDD9Q14511 834 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 PTPAQ15257 358 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 SF3A1Q15459 793 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 LY6KQ17RY6 165 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 TMEM63BQ5T3F8 832 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 B3GNT9Q6UX72 402 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 GIMAP8Q8ND71 665 aaPredicted RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 SH3TC2Q8TF17 1288 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 EMID1Q96A84 441 aaPredicted RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 ARMC5Q96C12 935 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 FAM20AQ96MK3 541 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 RIT2Q99578 217 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 ZNF577Q9BSK1 485 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 FTOQ9C0B1 505 aaKnown RBP eCLIP9.09□□□□□ -0.95
CIT-209ENST00000538073 TMEM60Q9H2L4 133 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 TBC1D22BQ9NU19 505 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 FAM184BQ9ULE4 1060 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 CEP131Q9UPN4 1083 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 GNEQ9Y223 722 aaKnown RBP9.09□□□□□ -0.95
CIT-209ENST00000538073 FRMPD3Q5JV73 1810 aa9.09□□□□□ -0.95
CIT-209ENST00000538073 TCHHQ07283 1943 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 DUSP11O75319 330 aaKnown RBP9.08□□□□□ -0.96
CIT-209ENST00000538073 YEATS4O95619 227 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 OR52Z1P0C646 297 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
CIT-209ENST00000538073 NKX3-2P78367 333 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 ARHGAP1Q07960 439 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 SLC39A14Q15043 492 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 CALCRLQ16602 461 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 CELF3Q5SZQ8 465 aaKnown RBP9.08□□□□□ -0.96
CIT-209ENST00000538073 ARL6IP4Q66PJ3 421 aaKnown RBP9.08□□□□□ -0.96
CIT-209ENST00000538073 SLFN12Q8IYM2 578 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 TNS4Q8IZW8 715 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 LINC00301Q8NCQ3 95 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 TNPO1Q92973 898 aaKnown RBP9.08□□□□□ -0.96
CIT-209ENST00000538073 ZNF333Q96JL9 665 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 MCOLN1Q9GZU1 580 aa9.08□□□□□ -0.96
CIT-209ENST00000538073 BCAS3Q9H6U6 928 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms