RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 MMP1P03956 469 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 NR3C2P08235 984 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 SMIM10L2AP0DMW4 78 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 SMIM10L2BP0DMW5 78 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 MYCLP12524 364 aaPredicted RBP13.03□□□□□ -0.32
CLPB-208ENST00000538021 AVPR2P30518 371 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 RRP1P56182 461 aaKnown RBP13.03□□□□□ -0.32
CLPB-208ENST00000538021 SIGLEC14Q08ET2 396 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
CLPB-208ENST00000538021 VPS53Q5VIR6 699 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 MYSM1Q5VVJ2 828 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 APBB2Q92870 758 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 PPP2R3CQ969Q6 453 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 MSLNLQ96KJ4 702 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 RPGRIP1Q96KN7 1286 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 C16orf70Q9BSU1 422 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 PXMP2Q9NR77 195 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 TCP11L1Q9NUJ3 509 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 ADGRA3Q8IWK6 1321 aa13.03□□□□□ -0.32
CLPB-208ENST00000538021 H3BRB1 525 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 CAND2O75155 1236 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 EYA4O95677 639 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 FGRP09769 529 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 LINC00271P0C7V0 271 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
CLPB-208ENST00000538021 HNRNPUQ00839 825 aaKnown RBP eCLIP13.02□□□□□ -0.33
CLPB-208ENST00000538021 BTG3Q14201 252 aaPredicted RBP13.02□□□□□ -0.33
CLPB-208ENST00000538021 CELF3Q5SZQ8 465 aaKnown RBP13.02□□□□□ -0.33
CLPB-208ENST00000538021 GPATCH4Q5T3I0 446 aaKnown RBP13.02□□□□□ -0.33
CLPB-208ENST00000538021 RNPEPQ9H4A4 650 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 TUT1Q9H6E5 874 aaKnown RBP13.02□□□□□ -0.33
CLPB-208ENST00000538021 MLXIPQ9HAP2 919 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 CLEC1BQ9P126 229 aa13.02□□□□□ -0.33
CLPB-208ENST00000538021 PTPRZ1P23471 2315 aaPredicted RBP13.02□□□□□ -0.33
CLPB-208ENST00000538021 DCHS1Q96JQ0 3298 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 SPTBN4Q9H254 2564 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 DHX16O60231 1041 aaKnown RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 KDM4AO75164 1064 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 CFBP00751 764 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 SNHG28P0DPA3 235 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 HSPD1P10809 573 aaKnown RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 CAMK1Q14012 370 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 KCNV1Q6PIU1 500 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 RBM23Q86U06 439 aaKnown RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 SMRP1Q8NCR6 262 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 CLP1Q92989 425 aaKnown RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 TTC14Q96N46 770 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 MAF1Q9H063 256 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 PLAGL2Q9UPG8 496 aa13.01□□□□□ -0.33
CLPB-208ENST00000538021 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 USP15Q9Y4E8 981 aaPredicted RBP13.01□□□□□ -0.33
CLPB-208ENST00000538021 CACNA1HO95180 2353 aa13□□□□□ -0.33
CLPB-208ENST00000538021 GNAT1P11488 350 aa13□□□□□ -0.33
CLPB-208ENST00000538021 UBA1P22314 1058 aaKnown RBP13□□□□□ -0.33
CLPB-208ENST00000538021 NRIP1P48552 1158 aa13□□□□□ -0.33
CLPB-208ENST00000538021 SP2Q02086 613 aa13□□□□□ -0.33
CLPB-208ENST00000538021 COASYQ13057 564 aa13□□□□□ -0.33
CLPB-208ENST00000538021 CBX2Q14781 532 aaPredicted RBP13□□□□□ -0.33
CLPB-208ENST00000538021 ASCL5Q7RTU5 278 aa13□□□□□ -0.33
CLPB-208ENST00000538021 EFHBQ8N7U6 833 aa13□□□□□ -0.33
CLPB-208ENST00000538021 ASIC4Q96FT7 647 aa13□□□□□ -0.33
CLPB-208ENST00000538021 ZFP91Q96JP5 570 aaPredicted RBP13□□□□□ -0.33
CLPB-208ENST00000538021 PHF7Q9BWX1 381 aaPredicted RBP13□□□□□ -0.33
CLPB-208ENST00000538021 PLVAPQ9BX97 442 aa13□□□□□ -0.33
CLPB-208ENST00000538021 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
CLPB-208ENST00000538021 SETD4Q9NVD3 440 aa13□□□□□ -0.33
CLPB-208ENST00000538021 TTC41PQ6P2S7 1318 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 CCDC171Q6TFL3 1326 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
CLPB-208ENST00000538021 RGS20O76081 388 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 LGALS2P05162 132 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 GHRP10912 638 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 DNAJB1P25685 340 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 HOXC8P31273 242 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 HAND2P61296 217 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 ZBTB33Q86T24 672 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 MIER1Q8N108 512 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
CLPB-208ENST00000538021 RC3H2Q9HBD1 1191 aaKnown RBP12.99□□□□□ -0.33
CLPB-208ENST00000538021 CACNA1AO00555 2505 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 ENPP3O14638 875 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 PDGFBP01127 241 aaPredicted RBP12.98□□□□□ -0.33
CLPB-208ENST00000538021 FGAP02671 866 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 ICAM3P32942 547 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 ARHGAP4P98171 946 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 ALX1Q15699 326 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 SPPL3Q8TCT6 385 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 POF1BQ8WVV4 589 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 GPKOWQ92917 476 aaPredicted RBP eCLIP12.98□□□□□ -0.33
CLPB-208ENST00000538021 P2RX5Q93086 422 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 PDCD2LQ9BRP1 358 aa12.98□□□□□ -0.33
CLPB-208ENST00000538021 TRPC6Q9Y210 931 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms