RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 RSPO4Q2I0M5 234 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 CCDC158Q5M9N0 1113 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 MFSD14CQ5VZR4 134 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 FAM109BQ6ICB4 259 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 TMED8Q6PL24 325 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 DIS3LQ8TF46 1054 aaKnown RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 WFDC12Q8WWY7 111 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 TRIB2Q92519 343 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 ARHGAP45Q92619 1136 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 P2RX7Q99572 595 aaKnown RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 SSBP4Q9BWG4 385 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 KRTAP4-6Q9BYQ5 205 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 MTMR10Q9NXD2 777 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 HMG20BQ9P0W2 317 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 FOXD3Q9UJU5 478 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 BRPF3Q9ULD4 1205 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 NOB1Q9ULX3 412 aaKnown RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 PA2G4Q9UQ80 394 aaKnown RBP6.5□□□□□ -1.37
SNHG1-207ENST00000537965 SIPA1L1O43166 1804 aa6.5□□□□□ -1.37
SNHG1-207ENST00000537965 MAST2Q6P0Q8 1798 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 PDE2AO00408 941 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 EDN3P14138 238 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 ACPPP15309 386 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 SYN1P17600 705 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 USP14P54578 494 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 ERVK-24P63145 666 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 CACNB2Q08289 660 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 NAA16Q6N069 864 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 PLEKHH3Q7Z736 793 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 CCDC84Q86UT8 332 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 TMEM130Q8N3G9 435 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 GALNT11Q8NCW6 608 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 EDC3Q96F86 508 aaKnown RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 APBA2Q99767 749 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 MRPL18Q9H0U6 180 aaKnown RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-207ENST00000537965 RABGAP1Q9Y3P9 1069 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 IVNS1ABPQ9Y6Y0 642 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 PLXNA1Q9UIW2 1896 aa6.49□□□□□ -1.37
SNHG1-207ENST00000537965 PRUNE2Q8WUY3 3088 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 TM4SF5O14894 197 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 STRNO43815 780 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 GNAI2P04899 355 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 COL6A1P12109 1028 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 EPHA1P21709 976 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 NOS3P29474 1203 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 ATP2B2Q01814 1243 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 TTC39AQ5SRH9 613 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 GPR142Q7Z601 462 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 METTL16Q86W50 562 aaKnown RBP6.48□□□□□ -1.37
SNHG1-207ENST00000537965 TMEM102Q8N9M5 508 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-207ENST00000537965 ARRDC4Q8NCT1 418 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 TGFBRAP1Q8WUH2 860 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 USP6NLQ92738 828 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 HHIPQ96QV1 700 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 PAGR1Q9BTK6 254 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 SEMA6BQ9H3T3 888 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 CABP5Q9NP86 173 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 GPR108Q9NPR9 543 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 AATFQ9NY61 560 aaKnown RBP eCLIP6.48□□□□□ -1.371e-323■□□□□ 9
SNHG1-207ENST00000537965 SLC5A4Q9NY91 659 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.48□□□□□ -1.37
SNHG1-207ENST00000537965 RBPJLQ9UBG7 517 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 UNC80Q8N2C7 3258 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 PFASO15067 1338 aa6.48□□□□□ -1.37
SNHG1-207ENST00000537965 SLC15A5A6NIM6 579 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 NDUFB5O43674 189 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 BRD1O95696 1058 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 H2AFB1P0C5Y9 115 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 H2AFB2P0C5Z0 115 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 ITGB7P26010 798 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 MCAMP43121 646 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 LRRC26Q2I0M4 334 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 FAM117BQ6P1L5 589 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 TXNDC11Q6PKC3 985 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 LBX2Q6XYB7 198 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 TTC6Q86TZ1 520 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 TRMT2AQ8IZ69 625 aaKnown RBP6.47□□□□□ -1.37
SNHG1-207ENST00000537965 KLHL23Q8NBE8 558 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 SH3RF3Q8TEJ3 882 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-207ENST00000537965 ZNF384Q8TF68 577 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 LPAR1Q92633 364 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 NXPE3Q969Y0 559 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 ZNF512BQ96KM6 892 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-207ENST00000537965 C12orf42Q96LP6 360 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 CITED4Q96RK1 184 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 OSMRQ99650 979 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 MEIS3Q99687 375 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 FEZ1Q99689 392 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 ZKSCAN3Q9BRR0 538 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 SENP6Q9GZR1 1112 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-207ENST00000537965 AKTIPQ9H8T0 292 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 TXNRD2Q9NNW7 524 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 HOXC10Q9NYD6 342 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 ZBTB21Q9ULJ3 1066 aa6.47□□□□□ -1.37
SNHG1-207ENST00000537965 GNEQ9Y223 722 aaKnown RBP6.47□□□□□ -1.37
SNHG1-207ENST00000537965 COL11A1P12107 1806 aaPredicted RBP6.46□□□□□ -1.37
SNHG1-207ENST00000537965 LTBP2Q14767 1821 aa6.46□□□□□ -1.37
SNHG1-207ENST00000537965 KBTBD13C9JR72 458 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms