RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 XRRA1Q6P2D8 792 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 METTL7BQ6UX53 244 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 SERINC5Q86VE9 423 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 ADAMTS19Q8TE59 1207 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 ATP6V0A1Q93050 837 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 WNT8BQ93098 351 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 USP26Q9BXU7 913 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 LSG1Q9H089 658 aaKnown RBP11.16□□□□□ -0.62
CHD4-207ENST00000537634 RTEL1Q9NZ71 1219 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 TTC28Q96AY4 2481 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 CHD9Q3L8U1 2897 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 PRUNE2Q8WUY3 3088 aa11.16□□□□□ -0.62
CHD4-207ENST00000537634 PRRC2BQ5JSZ5 2229 aaKnown RBP11.15□□□□□ -0.62
CHD4-207ENST00000537634 EPOPA6NHQ4 379 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 RSPH10B2B2RC85 870 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 PIK3CDO00329 1044 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 SLC27A2O14975 620 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 LGR5O75473 907 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 PLEKHA8P1O95397 391 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 RSPH10BP0C881 870 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 SMIM10L2AP0DMW4 78 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 SMIM10L2BP0DMW5 78 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 GNAT1P11488 350 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 RXRAP19793 462 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
CHD4-207ENST00000537634 HIC1Q14526 733 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 MBTPS1Q14703 1052 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 AAK1Q2M2I8 961 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 TMCO2Q7Z6W1 182 aaPredicted RBP11.15□□□□□ -0.62
CHD4-207ENST00000537634 NLRX1Q86UT6 975 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 ESYT1Q9BSJ8 1104 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 ANO2Q9NQ90 1003 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 ZNF215Q9UL58 517 aaPredicted RBP11.15□□□□□ -0.62
CHD4-207ENST00000537634 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 MTCH2Q9Y6C9 303 aa11.15□□□□□ -0.62
CHD4-207ENST00000537634 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 LCHNA4D1U4 455 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 MEIS2O14770 477 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 CAND2O75155 1236 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 GJB5O95377 273 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 HOXC8P31273 242 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 LIFRP42702 1097 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 SP4Q02446 784 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 SEMA3FQ13275 785 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 TCTN1Q2MV58 587 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 CREB3L3Q68CJ9 461 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 FAM117BQ6P1L5 589 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 TRIM50Q86XT4 487 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 CMTR1Q8N1G2 835 aaKnown RBP11.14□□□□□ -0.63
CHD4-207ENST00000537634 SRBD1Q8N5C6 995 aaKnown RBP11.14□□□□□ -0.63
CHD4-207ENST00000537634 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
CHD4-207ENST00000537634 RAD9AQ99638 391 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 GPR20Q99678 358 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 SENP7Q9BQF6 1050 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 PSTPIP2Q9H939 334 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 SIP14410 1827 aa11.14□□□□□ -0.63
CHD4-207ENST00000537634 SPDYE3A6NKU9 549 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 TREHO43280 583 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 AMHP03971 560 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 CTSHP09668 335 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 TFF2Q03403 129 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 GRB10Q13322 594 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 NECTIN1Q15223 517 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 UTP14CQ5TAP6 766 aaKnown RBP11.13□□□□□ -0.63
CHD4-207ENST00000537634 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 KRT40Q6A162 431 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 SPRED2Q7Z698 418 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 MICU3Q86XE3 530 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 RAB11FIP4Q86YS3 637 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 GDPD5Q8WTR4 605 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 GPRASP2Q96D09 838 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 CDHR1Q96JP9 859 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 UHRF1Q96T88 793 aaPredicted RBP11.13□□□□□ -0.63
CHD4-207ENST00000537634 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 RNPEPQ9H4A4 650 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 MTUS1Q9ULD2 1270 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
CHD4-207ENST00000537634 CHD7Q9P2D1 2997 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 ARHGAP4P98171 946 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 COL9A3Q14050 684 aaPredicted RBP11.12□□□□□ -0.63
CHD4-207ENST00000537634 UBE2SQ16763 222 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 PLEKHG4Q58EX7 1191 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 SYNE3Q6ZMZ3 975 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 TMTC3Q6ZXV5 915 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 HEATR3Q7Z4Q2 680 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 MYOCDQ8IZQ8 938 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 CCDC82Q8N4S0 544 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 FANCBQ8NB91 859 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 LMBR1Q8WVP7 490 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 SEPT8Q92599 483 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 TGS1Q96RS0 853 aaKnown RBP11.12□□□□□ -0.63
CHD4-207ENST00000537634 EHMT1Q9H9B1 1298 aa11.12□□□□□ -0.63
CHD4-207ENST00000537634 SETD4Q9NVD3 440 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms