RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CHST13Q8NET6 341 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 CLEC4DQ8WXI8 215 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 TMEM168Q9H0V1 697 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 ASH2LQ9UBL3 628 aa8.48□□□□□ -1.05
CCDC7-208ENST00000537047 USP53Q70EK8 1073 aa8.47□□□□□ -1.05
CCDC7-208ENST00000537047 TINF2Q9BSI4 451 aa8.47□□□□□ -1.05
CCDC7-208ENST00000537047 SMOC1Q9H4F8 434 aa8.47□□□□□ -1.05
CCDC7-208ENST00000537047 GPR42O15529 346 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 LTFP02788 710 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 COL6A1P12109 1028 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 CDSNQ15517 529 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 SPRED1Q7Z699 444 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 KBTBD2Q8IY47 623 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 KCTD13Q8WZ19 329 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 PHF20Q9BVI0 1012 aa8.46□□□□□ -1.06
CCDC7-208ENST00000537047 COL6A2P12110 1019 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 MAP4K2Q12851 820 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 KRTAP5-3Q6L8H2 238 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 PKN3Q6P5Z2 889 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 TRMT10BQ6PF06 316 aaKnown RBP8.45□□□□□ -1.06
CCDC7-208ENST00000537047 KCNT2Q6UVM3 1135 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 TMEM209Q96SK2 561 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 SLC6A20Q9NP91 592 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 ZDHHC9Q9Y397 364 aa8.45□□□□□ -1.06
CCDC7-208ENST00000537047 BLACEA4D250 179 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 B4GALT4O60513 344 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 DVL3Q92997 716 aaPredicted RBP8.44□□□□□ -1.06
CCDC7-208ENST00000537047 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 NUDT11Q96G61 164 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 GPR27Q9NS67 375 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 TELO2Q9Y4R8 837 aa8.44□□□□□ -1.06
CCDC7-208ENST00000537047 NTRK3Q16288 839 aa8.43□□□□□ -1.06
CCDC7-208ENST00000537047 SLC16A11Q8NCK7 471 aa8.43□□□□□ -1.06
CCDC7-208ENST00000537047 PHOSPHO1Q8TCT1 267 aa8.43□□□□□ -1.06
CCDC7-208ENST00000537047 SH3RF3Q8TEJ3 882 aaPredicted RBP8.43□□□□□ -1.06
CCDC7-208ENST00000537047 KCNJ15Q99712 375 aa8.43□□□□□ -1.06
CCDC7-208ENST00000537047 CD248Q9HCU0 757 aa8.43□□□□□ -1.06
CCDC7-208ENST00000537047 NPEPPSL1A6NEC2 478 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 FSHBP01225 129 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 TCF3P15923 654 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 DNAJA1P31689 397 aaKnown RBP8.42□□□□□ -1.06
CCDC7-208ENST00000537047 PPP2CBP62714 309 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 PPP2CAP67775 309 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 ARID5AQ03989 594 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 NFATC3Q12968 1075 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 ZNF585AQ6P3V2 769 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 OTOP3Q7RTS5 596 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 EPN3Q9H201 632 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 FTSJ1Q9UET6 329 aa8.42□□□□□ -1.06
CCDC7-208ENST00000537047 AGRPO00253 132 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 KRIT1O00522 736 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 NKRFO15226 690 aaKnown RBP eCLIP8.41□□□□□ -1.06
CCDC7-208ENST00000537047 PRODHO43272 600 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 TUSC3Q13454 348 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 GNL2Q13823 731 aaKnown RBP8.41□□□□□ -1.06
CCDC7-208ENST00000537047 DDR2Q16832 855 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 YOD1Q5VVQ6 348 aaPredicted RBP8.41□□□□□ -1.06
CCDC7-208ENST00000537047 HOMEZQ8IX15 550 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 DTX3Q8N9I9 347 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 JADE2Q9NQC1 790 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 ARHGEF4Q9NR80 690 aa8.41□□□□□ -1.06
CCDC7-208ENST00000537047 KLHL18O94889 574 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 CKMP06732 381 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 EPHB4P54760 987 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 SURF1Q15526 300 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 VASNQ6EMK4 673 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 ARHGEF18Q6ZSZ5 1173 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 PLEKHH3Q7Z736 793 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 KLHL36Q8N4N3 616 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 SCAND2PQ9GZW5 306 aaPredicted RBP8.4□□□□□ -1.06
CCDC7-208ENST00000537047 HSPBP1Q9NZL4 362 aa8.4□□□□□ -1.06
CCDC7-208ENST00000537047 GRK2P25098 689 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 GRK3P35626 688 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 GLRBP48167 497 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 CYP4F22Q6NT55 531 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 LBX2Q6XYB7 198 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 CIR1Q86X95 450 aaPredicted RBP8.39□□□□□ -1.07
CCDC7-208ENST00000537047 PALM2Q8IXS6 379 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 Q8N1X5 172 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 DNERQ8NFT8 737 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 TTLL11Q8NHH1 800 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 OSBP2Q969R2 916 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 KLC2Q9H0B6 622 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 MEGF9Q9H1U4 602 aa8.39□□□□□ -1.07
CCDC7-208ENST00000537047 KLF4O43474 513 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 MAFKO60675 156 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 CYP7B1O75881 506 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 HSP90AA2PQ14568 343 aaPredicted RBP8.38□□□□□ -1.07
CCDC7-208ENST00000537047 SKIDA1Q1XH10 827 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 PAN2Q504Q3 1202 aaKnown RBP8.38□□□□□ -1.07
CCDC7-208ENST00000537047 GPR155Q7Z3F1 870 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 TRIM48Q8IWZ4 208 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 KISS1RQ969F8 398 aaPredicted RBP8.38□□□□□ -1.07
CCDC7-208ENST00000537047 AARSD1Q9BTE6 412 aaKnown RBP8.38□□□□□ -1.07
CCDC7-208ENST00000537047 DLL4Q9NR61 685 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 TSC22D4Q9Y3Q8 395 aa8.38□□□□□ -1.07
CCDC7-208ENST00000537047 R3HCC1Q9Y3T6 440 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms