RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 UBE2OQ9C0C9 1292 aaKnown RBP15.42■□□□□ 0.06
RPAIN-205ENST00000536255 TBX21Q9UL17 535 aa15.42■□□□□ 0.06
RPAIN-205ENST00000536255 LTBP2Q14767 1821 aa15.42■□□□□ 0.06
RPAIN-205ENST00000536255 MAFGO15525 162 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 DTNBO60941 627 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 RAG1P15918 1043 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 ITGB8P26012 769 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 KRT2P35908 639 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 ZNF76P36508 570 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 ARHGAP4P98171 946 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 SEMA3FQ13275 785 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 KRT25Q7Z3Z0 450 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 RASGRP4Q8TDF6 673 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 BADQ92934 168 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 GPRASP2Q96D09 838 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 SPATA33Q96N06 139 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 RNF39Q9H2S5 420 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
RPAIN-205ENST00000536255 TRIOBPQ9H2D6 2365 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 CCDC194A0A1B0GVG4 234 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 SORBS3O60504 671 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 B4GALT4O60513 344 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 MMP1P03956 469 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 CYP3A4P08684 503 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 HOXD8P13378 290 aaPredicted RBP15.4■□□□□ 0.06
RPAIN-205ENST00000536255 ITGB5P18084 799 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 CUL4AQ13619 759 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 NEDD9Q14511 834 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 NONOQ15233 471 aaKnown RBP eCLIP15.4■□□□□ 0.06
RPAIN-205ENST00000536255 NPY5RQ15761 445 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 NBPF20Q3BBV1 942 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 HSDL1Q3SXM5 330 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 CEP55Q53EZ4 464 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 KRT40Q6A162 431 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 NFRKBQ6P4R8 1299 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 TRPV6Q9H1D0 765 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 MLXIPQ9HAP2 919 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 UBIAD1Q9Y5Z9 338 aa15.4■□□□□ 0.06
RPAIN-205ENST00000536255 SCN10AQ9Y5Y9 1956 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 M0R2N6 131 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 TIMP1P01033 207 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 GJB2P29033 226 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 USP11P51784 963 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 FOSBP53539 338 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 MTMR1Q13613 665 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 FAM47CQ5HY64 1035 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 METTL7BQ6UX53 244 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 TDHQ8IZJ6 230 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 GIMAP8Q8ND71 665 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-205ENST00000536255 FBXO18Q8NFZ0 1043 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 KAT2BQ92831 832 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 INTS4Q96HW7 963 aaKnown RBP15.39■□□□□ 0.05
RPAIN-205ENST00000536255 SENP7Q9BQF6 1050 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 MXRA8Q9BRK3 442 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 BCAS3Q9H6U6 928 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 JADE2Q9NQC1 790 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 GJB4Q9NTQ9 266 aa15.39■□□□□ 0.05
RPAIN-205ENST00000536255 NOP56O00567 594 aaKnown RBP15.38■□□□□ 0.05
RPAIN-205ENST00000536255 F2P00734 622 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 ZNF286BP0CG31 522 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 FXR1P51114 621 aaKnown RBP eCLIP15.38■□□□□ 0.05
RPAIN-205ENST00000536255 CHMP4BP1P59074 171 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 SETQ01105 290 aaPredicted RBP15.38■□□□□ 0.05
RPAIN-205ENST00000536255 PTPN11Q06124 597 aaPredicted RBP15.38■□□□□ 0.05
RPAIN-205ENST00000536255 CYFIP1Q7L576 1253 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 NIPA1Q7RTP0 329 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
RPAIN-205ENST00000536255 TBCKQ8TEA7 893 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 CRYGNQ8WXF5 182 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 KATNAL1Q9BW62 490 aa15.38■□□□□ 0.05
RPAIN-205ENST00000536255 TRMT13Q9NUP7 481 aaKnown RBP15.38■□□□□ 0.05
RPAIN-205ENST00000536255 ADAMTS3O15072 1205 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 SUPT20HL2P0C7V6 817 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 KCNA2P16389 499 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 CIITAP33076 1130 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 FPGSQ05932 587 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
RPAIN-205ENST00000536255 PIK3AP1Q6ZUJ8 805 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 OXER1Q8TDS5 423 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 PPP1R13LQ8WUF5 828 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 NAP1L4Q99733 375 aaKnown RBP15.37■□□□□ 0.05
RPAIN-205ENST00000536255 PPP1R12CQ9BZL4 782 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 HIPK3Q9H422 1215 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 LAMA3Q16787 3333 aa15.37■□□□□ 0.05
RPAIN-205ENST00000536255 BTBD18B2RXH4 712 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 H3BQV1 296 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 HAS3O00219 553 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 MEIS1O00470 390 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 ATP9AO75110 1047 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 HSP90AA1P07900 732 aaKnown RBP15.36■□□□□ 0.05
RPAIN-205ENST00000536255 PDCP20941 246 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 PSEN2P49810 448 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 MFSD10Q14728 455 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 MFSD5Q6N075 450 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 MOXD1Q6UVY6 613 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 NEK8Q86SG6 692 aa15.36■□□□□ 0.05
RPAIN-205ENST00000536255 SESTD1Q86VW0 696 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms