RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 GINM1Q9NU53 330 aa4.39□□□□□ -1.71
SKA3-207ENST00000536239 TMEFF2Q9UIK5 374 aaPredicted RBP4.39□□□□□ -1.71
SKA3-207ENST00000536239 H7BY64 318 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 MYO1BO43795 1136 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 COMTP21964 271 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 DGCR2P98153 550 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 PPP2R5EQ16537 467 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 TAX1BP1Q86VP1 789 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 GIPC2Q8TF65 315 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 AJUBAQ96IF1 538 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 MRGPRX3Q96LB0 322 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 RBPJLQ9UBG7 517 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 FBXL7Q9UJT9 491 aa4.38□□□□□ -1.71
SKA3-207ENST00000536239 A0A087X1B8 175 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 CHGBP05060 677 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 CSF2RBP32927 897 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 SOX9P48436 509 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 ZNF143P52747 638 aaPredicted RBP4.37□□□□□ -1.71
SKA3-207ENST00000536239 INHBCP55103 352 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 RACK1P63244 317 aaKnown RBP4.37□□□□□ -1.71
SKA3-207ENST00000536239 SMAD2Q15796 467 aaKnown RBP4.37□□□□□ -1.71
SKA3-207ENST00000536239 PHF19Q5T6S3 580 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 VHLLQ6RSH7 139 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 PROSER1Q86XN7 944 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 RCBTB1Q8NDN9 531 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.37□□□□□ -1.71
SKA3-207ENST00000536239 MYOTQ9UBF9 498 aa4.37□□□□□ -1.71
SKA3-207ENST00000536239 MEFVO15553 781 aaPredicted RBP4.36□□□□□ -1.71
SKA3-207ENST00000536239 KNG1P01042 644 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 CASP7P55210 303 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 FANCCQ00597 558 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 KCNAB2Q13303 367 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 LSAMPQ13449 338 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 CCDC27Q2M243 656 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 VASNQ6EMK4 673 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 Q6ZSN1 163 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 GPR155Q7Z3F1 870 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 DNAJC10Q8IXB1 793 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 FUKQ8N0W3 1084 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 DTX3Q8N9I9 347 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 PHOSPHO1Q8TCT1 267 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 NEU4Q8WWR8 484 aaPredicted RBP4.36□□□□□ -1.71
SKA3-207ENST00000536239 NEIL1Q96FI4 390 aaPredicted RBP4.36□□□□□ -1.71
SKA3-207ENST00000536239 CHAMP1Q96JM3 812 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 LGR4Q9BXB1 951 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 SMOC1Q9H4F8 434 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 WDR26Q9H7D7 661 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 DLL4Q9NR61 685 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 EFR3BQ9Y2G0 817 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 TNFRSF18Q9Y5U5 241 aa4.36□□□□□ -1.71
SKA3-207ENST00000536239 DGKIO75912 1065 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 NAT2P11245 290 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 HOXC12P31275 282 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 TESK1Q15569 626 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 C1orf210Q8IVY1 113 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 IFNL2Q8IZJ0 200 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 KREMEN2Q8NCW0 462 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 PPP1R14AQ96A00 147 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 SPATA32Q96LK8 384 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 EPB41L1Q9H4G0 881 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 METTL5Q9NRN9 209 aaKnown RBP4.35□□□□□ -1.71
SKA3-207ENST00000536239 ASH2LQ9UBL3 628 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 DDX41Q9UJV9 622 aaKnown RBP4.35□□□□□ -1.71
SKA3-207ENST00000536239 PCDHA2Q9Y5H9 948 aa4.35□□□□□ -1.71
SKA3-207ENST00000536239 MAFKO60675 156 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 FBXO21O94952 628 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 SCG5P05408 212 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 C1SP09871 688 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 LCP1P13796 627 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 ACO1P21399 889 aaKnown RBP4.34□□□□□ -1.71
SKA3-207ENST00000536239 ECI1P42126 302 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 HNRNPA0Q13151 305 aaKnown RBP4.34□□□□□ -1.71
SKA3-207ENST00000536239 PAK2Q13177 524 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 ACBD5Q5T8D3 534 aaPredicted RBP4.34□□□□□ -1.71
SKA3-207ENST00000536239 TRIM48Q8IWZ4 208 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 REXO1L1PQ8IX06 675 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 TTLL11Q8NHH1 800 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 BTN2A2Q8WVV5 523 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 KATNBL1Q9H079 304 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 CLDND1Q9NY35 253 aa4.34□□□□□ -1.71
SKA3-207ENST00000536239 PPFIA2O75334 1257 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 RAD17O75943 681 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 CKMP06732 381 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 SNRPB2P08579 225 aaKnown RBP4.33□□□□□ -1.72
SKA3-207ENST00000536239 LTBRP36941 435 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 USP10Q14694 798 aaKnown RBP4.33□□□□□ -1.72
SKA3-207ENST00000536239 CYP4F22Q6NT55 531 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 POLNQ7Z5Q5 900 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 LDLRAD3Q86YD5 345 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 IL17DQ8TAD2 202 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 CACTINQ8WUQ7 758 aaKnown RBP4.33□□□□□ -1.72
SKA3-207ENST00000536239 ZG16BQ96DA0 208 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 SHDQ96IW2 340 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 PLEKHG4BQ96PX9 1271 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 BACH2Q9BYV9 841 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 KCND1Q9NSA2 647 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 ZFP69BQ9UJL9 534 aa4.33□□□□□ -1.72
SKA3-207ENST00000536239 KRIT1O00522 736 aa4.32□□□□□ -1.72
SKA3-207ENST00000536239 U2SURPO15042 1029 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms