RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GYG1P46976 350 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 SIK1P57059 783 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 NLRP5P59047 1200 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CHMP4BP1P59074 171 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 AMPD2Q01433 879 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 PAK1Q13153 545 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CLN3Q13286 438 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 SF3B2Q13435 895 aaKnown RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 SMC1AQ14683 1233 aaKnown RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 MTFR1Q15390 333 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 TLR1Q15399 786 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 LONRF2Q1L5Z9 754 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CAVIN4Q5BKX8 364 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 TCP11X2Q5H9J9 407 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 BEND6Q5SZJ8 279 aaPredicted RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 RRAGBQ5VZM2 374 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 GALNT17Q6IS24 598 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 KLHL10Q6JEL2 608 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CYP26C1Q6V0L0 522 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CAPN12Q6ZSI9 719 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 IRF2BP1Q8IU81 584 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 KRTAP1-3Q8IUG1 177 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 SLC35F6Q8N357 371 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CTCFLQ8NI51 663 aaPredicted RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 RNF217Q8TC41 542 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 ATRIPQ8WXE1 791 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CNKSR1Q969H4 720 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 NSUN4Q96CB9 384 aaKnown RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 PSMD1Q99460 953 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 PLCD4Q9BRC7 762 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CCSER1Q9C0I3 900 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 EPC1Q9H2F5 836 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 ANKZF1Q9H8Y5 726 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.43□□□□□ -1.382e-6■■■■■ 149.1
VPS33A-203ENST00000536212 ATP8A2Q9NTI2 1148 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 ABHD10Q9NUJ1 306 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 MINPP1Q9UNW1 487 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 CTNND2Q9UQB3 1225 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 NIP7Q9Y221 180 aaKnown RBP eCLIP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF652Q9Y2D9 606 aa6.43□□□□□ -1.38
VPS33A-203ENST00000536212 THRAP3Q9Y2W1 955 aaKnown RBP6.43□□□□□ -1.38
VPS33A-203ENST00000536212 PHLPP1O60346 1717 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 A0A1W2PRU2 124 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 LGALS16A8MUM7 142 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 KCNJ18B7U540 433 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 N4BP3O15049 544 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 KLRC4O43908 158 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 PARP1P09874 1014 aaKnown RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 KIF5BP33176 963 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 PTGIRP43119 386 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 GNAQP50148 359 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 PSMA6P60900 246 aaKnown RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 PIP4K2BP78356 416 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 KCNJ12Q14500 433 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 GRM4Q14833 912 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 NAALADL2Q58DX5 795 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 CCDC178Q5BJE1 867 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 MUM1L1Q5H9M0 696 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF569Q5MCW4 686 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 TBCELQ5QJ74 424 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 WWC2Q6AWC2 1192 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 RCSD1Q6JBY9 416 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 PIK3AP1Q6ZUJ8 805 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 DGKHQ86XP1 1220 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 NPAS4Q8IUM7 802 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 SMYD4Q8IYR2 804 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 BLIDQ8IZY5 108 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ADSSL1Q8N142 457 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 TXLNBQ8N3L3 684 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 STAG2Q8N3U4 1231 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 MB21D1Q8N884 522 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ANKRD20A12PQ8NF67 263 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF507Q8TCN5 953 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 HELQQ8TDG4 1101 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 NOC3LQ8WTT2 800 aaKnown RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 NELFBQ8WX92 580 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 SMARCC1Q92922 1105 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 EXOC4Q96A65 974 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 NAPGQ99747 312 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 CRNKL1Q9BZJ0 848 aaKnown RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 THAP9Q9H5L6 903 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 MAGEF1Q9HAY2 307 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 DCP1AQ9NPI6 582 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 LRRC4BQ9NT99 713 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 TCP11L1Q9NUJ3 509 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 TAB2Q9NYJ8 693 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ARPP21Q9UBL0 812 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ABCF2Q9UG63 623 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 L1RE1Q9UN81 338 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 REXO2Q9Y3B8 237 aaKnown RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 ZNF335Q9H4Z2 1342 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 IRS2Q9Y4H2 1338 aa6.42□□□□□ -1.38
VPS33A-203ENST00000536212 COL16A1Q07092 1604 aaPredicted RBP6.42□□□□□ -1.38
VPS33A-203ENST00000536212 WNK3Q9BYP7 1800 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 hCG_1642624A0A1W2PR95 340 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 TULP2O00295 520 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 PSMD14O00487 310 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 LAD1O00515 517 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 CDK2AP1O14519 115 aa6.41□□□□□ -1.38
VPS33A-203ENST00000536212 ADAMTS3O15072 1205 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms