RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TUT1Q9H6E5 874 aaKnown RBP15.1■□□□□ 0.01
RTN3-207ENST00000536011 PSTPIP2Q9H939 334 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 EHMT1Q9H9B1 1298 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 THEGQ9P2T0 379 aa15.1■□□□□ 0.01
RTN3-207ENST00000536011 C17orf102A2RUQ5 167 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 SPDYE3A6NKU9 549 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 TLL1O43897 1013 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 CAND2O75155 1236 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 PLEKHA8P1O95397 391 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 LGALS2P05162 132 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 MYOGP15173 224 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 WDR5P61964 334 aaKnown RBP15.09■□□□□ 0.01
RTN3-207ENST00000536011 IKBKEQ14164 716 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 ADGRE1Q14246 886 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 USP17L6PQ6QN14 398 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 CYFIP1Q7L576 1253 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 SERINC5Q86VE9 423 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 SGMS1Q86VZ5 419 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 SRBD1Q8N5C6 995 aaKnown RBP15.09■□□□□ 0.01
RTN3-207ENST00000536011 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 ZBED2Q9BTP6 218 aa15.09■□□□□ 0.01
RTN3-207ENST00000536011 TRIP12Q14669 1992 aaPredicted RBP15.09■□□□□ 0.01
RTN3-207ENST00000536011 MEIS2O14770 477 aa15.08■□□□□ 0
RTN3-207ENST00000536011 KRT32Q14532 448 aa15.08■□□□□ 0
RTN3-207ENST00000536011 TMTC3Q6ZXV5 915 aa15.08■□□□□ 0
RTN3-207ENST00000536011 MICU3Q86XE3 530 aa15.08■□□□□ 0
RTN3-207ENST00000536011 FANCBQ8NB91 859 aa15.08■□□□□ 0
RTN3-207ENST00000536011 IL27Q8NEV9 243 aa15.08■□□□□ 0
RTN3-207ENST00000536011 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 03e-6■□□□□ 9.4
RTN3-207ENST00000536011 ATP6V0A1Q93050 837 aa15.08■□□□□ 0
RTN3-207ENST00000536011 GPRASP2Q96D09 838 aa15.08■□□□□ 0
RTN3-207ENST00000536011 ZFP91Q96JP5 570 aaPredicted RBP15.08■□□□□ 0
RTN3-207ENST00000536011 RBM28Q9NW13 759 aaKnown RBP15.08■□□□□ 0
RTN3-207ENST00000536011 RTEL1Q9NZ71 1219 aa15.08■□□□□ 0
RTN3-207ENST00000536011 TTC28Q96AY4 2481 aa15.07■□□□□ 0
RTN3-207ENST00000536011 NBNO60934 754 aa15.07■□□□□ 0
RTN3-207ENST00000536011 SMIM10L2AP0DMW4 78 aa15.07■□□□□ 0
RTN3-207ENST00000536011 SMIM10L2BP0DMW5 78 aa15.07■□□□□ 0
RTN3-207ENST00000536011 RXRAP19793 462 aa15.07■□□□□ 0
RTN3-207ENST00000536011 THPOP40225 353 aa15.07■□□□□ 0
RTN3-207ENST00000536011 TRIM71Q2Q1W2 868 aaKnown RBP15.07■□□□□ 0
RTN3-207ENST00000536011 ZNF618Q5T7W0 954 aa15.07■□□□□ 0
RTN3-207ENST00000536011 HEATR3Q7Z4Q2 680 aa15.07■□□□□ 0
RTN3-207ENST00000536011 NEK1Q96PY6 1258 aa15.07■□□□□ 0
RTN3-207ENST00000536011 GPR20Q99678 358 aa15.07■□□□□ 0
RTN3-207ENST00000536011 MUC3AQ02505 3323 aa15.06■□□□□ 0
RTN3-207ENST00000536011 RSPH10B2B2RC85 870 aa15.06■□□□□ 0
RTN3-207ENST00000536011 CDC45O75419 566 aa15.06■□□□□ 0
RTN3-207ENST00000536011 LGR5O75473 907 aa15.06■□□□□ 0
RTN3-207ENST00000536011 HMGB1P09429 215 aaKnown RBP15.06■□□□□ 0
RTN3-207ENST00000536011 RSPH10BP0C881 870 aa15.06■□□□□ 0
RTN3-207ENST00000536011 HOXC8P31273 242 aa15.06■□□□□ 0
RTN3-207ENST00000536011 MRPS5P82675 430 aaKnown RBP15.06■□□□□ 0
RTN3-207ENST00000536011 TAP1Q03518 808 aa15.06■□□□□ 0
RTN3-207ENST00000536011 SEMA3FQ13275 785 aa15.06■□□□□ 0
RTN3-207ENST00000536011 CCDC85BQ15834 202 aaPredicted RBP15.06■□□□□ 0
RTN3-207ENST00000536011 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
RTN3-207ENST00000536011 APOA5Q6Q788 366 aa15.06■□□□□ 0
RTN3-207ENST00000536011 MICALL1Q8N3F8 863 aa15.06■□□□□ 0
RTN3-207ENST00000536011 TET1Q8NFU7 2136 aa15.06■□□□□ 0
RTN3-207ENST00000536011 ARNTL2Q8WYA1 636 aa15.06■□□□□ 0
RTN3-207ENST00000536011 RAD9AQ99638 391 aa15.06■□□□□ 0
RTN3-207ENST00000536011 LRRC2Q9BYS8 371 aa15.06■□□□□ 0
RTN3-207ENST00000536011 XIRP2A4UGR9 3374 aa15.06■□□□□ 0
RTN3-207ENST00000536011 hCG_1984214I3L0E3 225 aa15.05■□□□□ -0
RTN3-207ENST00000536011 MAFGO15525 162 aa15.05■□□□□ -0
RTN3-207ENST00000536011 ZBTB43O43298 467 aa15.05■□□□□ -0
RTN3-207ENST00000536011 GJB5O95377 273 aa15.05■□□□□ -0
RTN3-207ENST00000536011 POU3F3P20264 500 aaPredicted RBP15.05■□□□□ -0
RTN3-207ENST00000536011 ZNF200P98182 395 aaPredicted RBP15.05■□□□□ -0
RTN3-207ENST00000536011 SP4Q02446 784 aa15.05■□□□□ -0
RTN3-207ENST00000536011 MTMR1Q13613 665 aa15.05■□□□□ -0
RTN3-207ENST00000536011 GPNMBQ14956 572 aa15.05■□□□□ -0
RTN3-207ENST00000536011 AAK1Q2M2I8 961 aa15.05■□□□□ -0
RTN3-207ENST00000536011 DHX32Q7L7V1 743 aaKnown RBP15.05■□□□□ -0
RTN3-207ENST00000536011 CMTR1Q8N1G2 835 aaKnown RBP15.05■□□□□ -0
RTN3-207ENST00000536011 CCDC82Q8N4S0 544 aa15.05■□□□□ -0
RTN3-207ENST00000536011 ZNF713Q8N859 430 aaPredicted RBP15.05■□□□□ -0
RTN3-207ENST00000536011 GLT8D2Q9H1C3 349 aa15.05■□□□□ -0
RTN3-207ENST00000536011 NRCAMQ92823 1304 aa15.04■□□□□ -0
RTN3-207ENST00000536011 AMHP03971 560 aa15.04■□□□□ -0
RTN3-207ENST00000536011 RCAN1P53805 252 aa15.04■□□□□ -0
RTN3-207ENST00000536011 FGD1P98174 961 aa15.04■□□□□ -0
RTN3-207ENST00000536011 RTN1Q16799 776 aa15.04■□□□□ -0
RTN3-207ENST00000536011 TSGA10IPQ3SY00 556 aa15.04■□□□□ -0
RTN3-207ENST00000536011 UTP14CQ5TAP6 766 aaKnown RBP15.04■□□□□ -0
RTN3-207ENST00000536011 TRAF7Q6Q0C0 670 aa15.04■□□□□ -0
RTN3-207ENST00000536011 RAB11FIP4Q86YS3 637 aa15.04■□□□□ -0
RTN3-207ENST00000536011 SEPT8Q92599 483 aa15.04■□□□□ -0
RTN3-207ENST00000536011 WNT8BQ93098 351 aa15.04■□□□□ -0
RTN3-207ENST00000536011 ASB2Q96Q27 587 aa15.04■□□□□ -0
RTN3-207ENST00000536011 RNPEPQ9H4A4 650 aa15.04■□□□□ -0
RTN3-207ENST00000536011 CNTNAP5Q8WYK1 1306 aa15.03■□□□□ -0
RTN3-207ENST00000536011 hCG_1642624A0A1W2PR95 340 aa15.03■□□□□ -0
RTN3-207ENST00000536011 TREHO43280 583 aa15.03■□□□□ -0
RTN3-207ENST00000536011 FOSP01100 380 aaPredicted RBP15.03■□□□□ -0
RTN3-207ENST00000536011 RPLP2P05387 115 aaKnown RBP15.03■□□□□ -0
RTN3-207ENST00000536011 TCF7P36402 384 aaPredicted RBP15.03■□□□□ -0
RTN3-207ENST00000536011 NAPAP54920 295 aa15.03■□□□□ -0
RTN3-207ENST00000536011 DEFB103AP81534 67 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms