RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 TXKP42681 527 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 KRT85P78386 507 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 ATP2C1P98194 919 aaPredicted RBP17.61■□□□□ 0.41
CNN1-202ENST00000535659 CELF3Q5SZQ8 465 aaKnown RBP17.61■□□□□ 0.41
CNN1-202ENST00000535659 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
CNN1-202ENST00000535659 COPS5Q92905 334 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 GJA10Q969M2 543 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 CHAMP1Q96JM3 812 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 SDF4Q9BRK5 362 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 BCAS3Q9H6U6 928 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 MLXIPQ9HAP2 919 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 GNEQ9Y223 722 aaKnown RBP17.61■□□□□ 0.41
CNN1-202ENST00000535659 Q9Y3F1 56 aa17.61■□□□□ 0.41
CNN1-202ENST00000535659 NFASCO94856 1347 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 ADCY6O43306 1168 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 PSMD10O75832 226 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 GGPS1O95749 300 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 GH1P01241 217 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 PRPHP41219 470 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 STK38Q15208 465 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 LRCH2Q5VUJ6 765 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 LINC00301Q8NCQ3 95 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 MCOLN1Q9GZU1 580 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 RCOR1Q9UKL0 485 aa17.6■□□□□ 0.41
CNN1-202ENST00000535659 KIAA1217Q5T5P2 1943 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 GAS7O60861 476 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 DUSP11O75319 330 aaKnown RBP17.59■□□□□ 0.41
CNN1-202ENST00000535659 YEATS4O95619 227 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 NCLP19338 710 aaKnown RBP17.59■□□□□ 0.41
CNN1-202ENST00000535659 LAMC2Q13753 1193 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 GJC2Q5T442 439 aaPredicted RBP17.59■□□□□ 0.41
CNN1-202ENST00000535659 ARL6IP4Q66PJ3 421 aaKnown RBP17.59■□□□□ 0.41
CNN1-202ENST00000535659 METTL7BQ6UX53 244 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 DTHD1Q6ZMT9 781 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 ARMC5Q96C12 935 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 TEKT3Q9BXF9 490 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 UNC93B1Q9H1C4 597 aa17.59■□□□□ 0.41
CNN1-202ENST00000535659 TTC12Q9H892 705 aaPredicted RBP17.59■□□□□ 0.41
CNN1-202ENST00000535659 DDX20Q9UHI6 824 aaKnown RBP17.59■□□□□ 0.41
CNN1-202ENST00000535659 DYNC1LI2O43237 492 aaPredicted RBP17.58■□□□□ 0.41
CNN1-202ENST00000535659 SORBS3O60504 671 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 MSCO60682 206 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 RARBP10826 455 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 ARHGAP1Q07960 439 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 MTFR1Q15390 333 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 EMID1Q96A84 441 aaPredicted RBP17.58■□□□□ 0.41
CNN1-202ENST00000535659 ZNF333Q96JL9 665 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 SCAND2PQ9GZW5 306 aaPredicted RBP17.58■□□□□ 0.41
CNN1-202ENST00000535659 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.58■□□□□ 0.41
CNN1-202ENST00000535659 SLC9A2Q9UBY0 812 aa17.58■□□□□ 0.41
CNN1-202ENST00000535659 MORC2Q9Y6X9 1032 aaPredicted RBP17.58■□□□□ 0.41
CNN1-202ENST00000535659 MYH15Q9Y2K3 1946 aa17.58■□□□□ 0.4
CNN1-202ENST00000535659 DDX39AO00148 427 aaKnown RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 SPTLC2O15270 562 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 FARP2O94887 1054 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 MYCP01106 439 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 CCL5P13501 91 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 PTGS1P23219 599 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 MARCKSP29966 332 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 TECP42680 631 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 IL17AQ16552 155 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 AP5M1Q9H0R1 490 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 RNF208Q9H0X6 261 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 JPH1Q9HDC5 661 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 POTEFA5A3E0 1075 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 PPP6R2O75170 966 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 FXR2P51116 673 aaKnown RBP eCLIP17.57■□□□□ 0.4
CNN1-202ENST00000535659 KRT76Q01546 638 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 PDIA5Q14554 519 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 LHX8Q68G74 356 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 B3GNT9Q6UX72 402 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 OR6J1Q8NGC5 347 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 KCNG4Q8TDN1 519 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 LEO1Q8WVC0 666 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 FERMT2Q96AC1 680 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 LENG1Q96BZ8 264 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 SPATA33Q96N06 139 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 PAK6Q9NQU5 681 aaPredicted RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 TCEAL9Q9UHQ7 104 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 VAV3Q9UKW4 847 aa17.57■□□□□ 0.4
CNN1-202ENST00000535659 SRPRBQ9Y5M8 271 aaKnown RBP17.57■□□□□ 0.4
CNN1-202ENST00000535659 CCNE2O96020 404 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 GJA9P57773 515 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 SP4Q02446 784 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 PPP2R5CQ13362 524 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 TMEM266Q2M3C6 531 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 HSDL1Q3SXM5 330 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 ZNF746Q6NUN9 644 aaPredicted RBP17.56■□□□□ 0.4
CNN1-202ENST00000535659 TLK2Q86UE8 772 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 SEPT1Q8WYJ6 367 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 UNC45AQ9H3U1 944 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 SPC25Q9HBM1 224 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 XPNPEP3Q9NQH7 507 aa17.56■□□□□ 0.4
CNN1-202ENST00000535659 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
CNN1-202ENST00000535659 ACTR2P61160 394 aa17.55■□□□□ 0.4
CNN1-202ENST00000535659 SPIRE1Q08AE8 756 aa17.55■□□□□ 0.4
CNN1-202ENST00000535659 KRI1Q8N9T8 703 aaKnown RBP17.55■□□□□ 0.4
CNN1-202ENST00000535659 PPTC7Q8NI37 304 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms