RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 CNNM4Q6P4Q7 775 aa23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 NIPA1Q7RTP0 329 aa23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 RASAL3Q86YV0 1011 aa23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 GIMAP8Q8ND71 665 aaPredicted RBP23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 RMDN3Q96TC7 470 aa23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 ZNF577Q9BSK1 485 aa23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 SYNRGQ9UMZ2 1314 aa23.45■■□□□ 1.35
PDXDC1-205ENST00000535621 PDHXO00330 501 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 EML1O00423 815 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 PRCPP42785 496 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 PGM5Q15124 567 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 Q3C1V9 767 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 PXMP2Q9NR77 195 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 UBIAD1Q9Y5Z9 338 aa23.45■■□□□ 1.34
PDXDC1-205ENST00000535621 E9PMD0 336 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 EIF2AK2P19525 551 aaKnown RBP23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 FANCCQ00597 558 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 SPATA1Q5VX52 437 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 LRRC27Q9C0I9 530 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 SPATC1LQ9H0A9 340 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 KCNH7Q9NS40 1196 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 IFNKQ9P0W0 207 aa23.44■■□□□ 1.34
PDXDC1-205ENST00000535621 POTEFA5A3E0 1075 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 IPO5O00410 1097 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 OSBPP22059 807 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 STX17P56962 302 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 POTEGQ6S5H5 508 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 DRC7Q8IY82 874 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 ADSSL1Q8N142 457 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 PDCD2LQ9BRP1 358 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 POLR3CQ9BUI4 534 aaPredicted RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 WDR11Q9BZH6 1224 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 XPO4Q9C0E2 1151 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 ACAD9Q9H845 621 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 A1CFQ9NQ94 594 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 CTNND2Q9UQB3 1225 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 PVALEFA0A1B0GWK0 134 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 ESPNB1AK53 854 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 GAS7O60861 476 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 ZBTB48P10074 688 aaPredicted RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 PDE4DQ08499 809 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 DDX12PQ92771 950 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 CCDC47Q96A33 483 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 EIF2AK1Q9BQI3 630 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 MOV10L1Q9BXT6 1211 aaKnown RBP23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 MAF1Q9H063 256 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 EXOC1Q9NV70 894 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 RWDD2AQ9UIY3 292 aa23.43■■□□□ 1.34
PDXDC1-205ENST00000535621 GOLGA6L6A8MZA4 724 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 PLA2G4BP0C869 781 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 PAK1Q13153 545 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 B3GNT9Q6UX72 402 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 UNC13DQ70J99 1090 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 DYMQ7RTS9 669 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 ZSCAN30Q86W11 494 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 MB21D1Q8N884 522 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 RIT2Q99578 217 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 HSD17B14Q9BPX1 270 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 JADE2Q9NQC1 790 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 SAMSN1Q9NSI8 373 aaKnown RBP23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 CYP39A1Q9NYL5 469 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 MAPK8IP1Q9UQF2 711 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 ARHGEF16Q5VV41 709 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 SMC1BQ8NDV3 1235 aa23.42■■□□□ 1.34
PDXDC1-205ENST00000535621 STK4Q13043 487 aa23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 PABPC4Q13310 644 aaKnown RBP eCLIP23.41■■□□□ 1.346e-11■■■□□ 18.3
PDXDC1-205ENST00000535621 HSP90AA4PQ58FG1 418 aa23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 NCAPG2Q86XI2 1143 aa23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 RIOX2Q8IUF8 465 aa23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 NELFBQ8WX92 580 aa23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 GTPBP4Q9BZE4 634 aaKnown RBP23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.41■■□□□ 1.34
PDXDC1-205ENST00000535621 CHMP2AO43633 222 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 SLC12A3P55017 1021 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 CYP4A11Q02928 519 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 RGMBQ6NW40 437 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 DNAJC19Q96DA6 116 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 TEKT3Q9BXF9 490 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 RGL1Q9NZL6 768 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 NRBP1Q9UHY1 535 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 DNM3Q9UQ16 869 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 ZNFX1Q9P2E3 1918 aaKnown RBP23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 SERPINC1P01008 464 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 FCER1AP12319 257 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 ERCC3P19447 782 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 PSMC6P62333 389 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 MTMR1Q13613 665 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 KCTD17Q8N5Z5 321 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 CHST13Q8NET6 341 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 UNC45AQ9H3U1 944 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 AGO4Q9HCK5 861 aaKnown RBP23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 ZKSCAN5Q9Y2L8 839 aa23.4■■□□□ 1.34
PDXDC1-205ENST00000535621 DHX15O43143 795 aaKnown RBP23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 SSBP05455 408 aaKnown RBP eCLIP23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 MYCLP12524 364 aaPredicted RBP23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 UBASH3AP57075 661 aa23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 EHHADHQ08426 723 aa23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 XRRA1Q6P2D8 792 aa23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 SMCR8Q8TEV9 937 aaPredicted RBP23.39■■□□□ 1.34
PDXDC1-205ENST00000535621 TUFT1Q9NNX1 390 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms