RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LMCD1Q9NZU5 365 aa15.21■□□□□ 0.03
CLSTN3-205ENST00000535452 KIAA1217Q5T5P2 1943 aa15.21■□□□□ 0.02
CLSTN3-205ENST00000535452 SPATA31C2B4DYI2 1134 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 M0QZ92 97 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 CYTH3O43739 400 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 HOXD8P13378 290 aaPredicted RBP15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 ARHGAP4P98171 946 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 KRT32Q14532 448 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 TAF2Q6P1X5 1199 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 HEATR3Q7Z4Q2 680 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 SERINC5Q86VE9 423 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 IL31RAQ8NI17 732 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 GPRASP2Q96D09 838 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 ZFP91Q96JP5 570 aaPredicted RBP15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 MYL10Q9BUA6 226 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 GLT8D2Q9H1C3 349 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 TCEAL9Q9UHQ7 104 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 MTUS1Q9ULD2 1270 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 NAP1L2Q9ULW6 460 aaPredicted RBP15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 MTCH2Q9Y6C9 303 aa15.2■□□□□ 0.02
CLSTN3-205ENST00000535452 NRCAMQ92823 1304 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 CUL9Q8IWT3 2517 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 MAFGO15525 162 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 NBNO60934 754 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 CTSHP09668 335 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 POU3F3P20264 500 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 MTMR1Q13613 665 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 USP17L6PQ6QN14 398 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 MICU3Q86XE3 530 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 DHX38Q92620 1227 aaKnown RBP15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 SDF4Q9BRK5 362 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 ERAP1Q9NZ08 941 aa15.19■□□□□ 0.02
CLSTN3-205ENST00000535452 RFXAPO00287 272 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 RGS20O76081 388 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 ZNF76P36508 570 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 NAPAP54920 295 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 ZNF200P98182 395 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 SP2Q02086 613 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 GRB10Q13322 594 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 TEX2Q8IWB9 1127 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 CCDC82Q8N4S0 544 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 FANCBQ8NB91 859 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 DBF4BQ8NFT6 615 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 SEPT1Q8WYJ6 367 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 GPR20Q99678 358 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 ESYT1Q9BSJ8 1104 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 SMARCAD1Q9H4L7 1026 aa15.18■□□□□ 0.02
CLSTN3-205ENST00000535452 FRMPD4Q14CM0 1322 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 hCG_1984214I3L0E3 225 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 SLC27A2O14975 620 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 TREHO43280 583 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 FOSP01100 380 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 HMGB1P09429 215 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 TCF7P36402 384 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 ANTXR2P58335 489 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 DEFB103AP81534 67 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 MRPS9P82933 396 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 PPFIA1Q13136 1202 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 CREB3L3Q68CJ9 461 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 ZNF713Q8N859 430 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 SENP2Q9HC62 589 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 SETD4Q9NVD3 440 aa15.17■□□□□ 0.02
CLSTN3-205ENST00000535452 GBF1Q92538 1859 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 SCN5AQ14524 2016 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 CCDC196A0A1B0GTZ2 297 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 ZBTB43O43298 467 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 UPP2O95045 317 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 RXRAP19793 462 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 RTN1Q16799 776 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 C1QTNF1Q9BXJ1 281 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 IFIH1Q9BYX4 1025 aaKnown RBP15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 PKD2L1Q9P0L9 805 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 FAM50BQ9Y247 325 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 RWDD3Q9Y3V2 267 aa15.16■□□□□ 0.02
CLSTN3-205ENST00000535452 RRN3P2A6NIE6 340 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 PLEKHA8P1O95397 391 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 ERVK-21P61565 698 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 AKAP17AQ02040 695 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 TIGD5Q53EQ6 642 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 PLEKHG4Q58EX7 1191 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 IER5Q5VY09 327 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 PPP1R18Q6NYC8 613 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 CENPQQ7L2Z9 268 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 CCDC12Q8WUD4 166 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 GPKOWQ92917 476 aaPredicted RBP eCLIP15.15■□□□□ 0.024e-9■■■■■ 56.5
CLSTN3-205ENST00000535452 VWCEQ96DN2 955 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 JPH1Q9HDC5 661 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 TUBE1Q9UJT0 475 aa15.15■□□□□ 0.02
CLSTN3-205ENST00000535452 PCDHA6Q9UN73 950 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms