RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 GIMAP6Q6P9H5 292 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 KREMEN2Q8NCW0 462 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 DNERQ8NFT8 737 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 SPPL3Q8TCT6 385 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 MPHOSPH6Q99547 160 aaKnown RBP9.8□□□□□ -0.84
CLIP1-206ENST00000535290 SMOC2Q9H3U7 446 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 RC3H2Q9HBD1 1191 aaKnown RBP9.8□□□□□ -0.84
CLIP1-206ENST00000535290 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 GPR179Q6PRD1 2367 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 ATG2AQ2TAZ0 1938 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 ADGRA3Q8IWK6 1321 aa9.8□□□□□ -0.84
CLIP1-206ENST00000535290 ZFHX4Q86UP3 3567 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 MAP1BP46821 2468 aaKnown RBP9.79□□□□□ -0.84
CLIP1-206ENST00000535290 NMT2O60551 498 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 BRD1O95696 1058 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 ITGB1P05556 798 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 IFIT2P09913 472 aaKnown RBP9.79□□□□□ -0.84
CLIP1-206ENST00000535290 CCDC96Q2M329 555 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 ASTLQ6HA08 431 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-206ENST00000535290 KIAA2013Q8IYS2 634 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 CLASRPQ8N2M8 674 aaKnown RBP9.79□□□□□ -0.84
CLIP1-206ENST00000535290 VN1R2Q8NFZ6 395 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 PPP2R3CQ969Q6 453 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 HAUS7Q99871 368 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 KATNAL1Q9BW62 490 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 ZNF287Q9HBT7 754 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 IL17RBQ9NRM6 502 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 DDX41Q9UJV9 622 aaKnown RBP9.79□□□□□ -0.84
CLIP1-206ENST00000535290 STX8Q9UNK0 236 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 WDR87Q6ZQQ6 2873 aa9.79□□□□□ -0.84
CLIP1-206ENST00000535290 OTOGLQ3ZCN5 2332 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 MYH4Q9Y623 1939 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 PER2O15055 1255 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 ATP5JP18859 108 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 TDO2P48775 406 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 BTG3Q14201 252 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-206ENST00000535290 PUM1Q14671 1186 aaKnown RBP eCLIP9.78□□□□□ -0.84
CLIP1-206ENST00000535290 SYDE2Q5VT97 1194 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 BTNL9Q6UXG8 535 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 PPTC7Q8NI37 304 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 ATP6V0A1Q93050 837 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 OSBP2Q969R2 916 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 EMID1Q96A84 441 aaPredicted RBP9.78□□□□□ -0.84
CLIP1-206ENST00000535290 MRPL42Q9Y6G3 142 aaKnown RBP9.78□□□□□ -0.84
CLIP1-206ENST00000535290 PKD1L2Q7Z442 2459 aa9.78□□□□□ -0.84
CLIP1-206ENST00000535290 B4DLN1 442 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 TREHO43280 583 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 SORBS3O60504 671 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-206ENST00000535290 MRPL12P52815 198 aaKnown RBP9.77□□□□□ -0.85
CLIP1-206ENST00000535290 LAMC2Q13753 1193 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 KLHL23Q8NBE8 558 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 KCNG4Q8TDN1 519 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 ATP8B4Q8TF62 1192 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 POF1BQ8WVV4 589 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 TBC1D5Q92609 795 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 P2RX5Q93086 422 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 ZNF689Q96CS4 500 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-206ENST00000535290 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 TLE6Q9H808 572 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 DLL3Q9NYJ7 618 aa9.77□□□□□ -0.85
CLIP1-206ENST00000535290 FRMPD2Q68DX3 1309 aaPredicted RBP9.77□□□□□ -0.85
CLIP1-206ENST00000535290 NLRC5Q86WI3 1866 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 C17orf102A2RUQ5 167 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 ENPP3O14638 875 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 PI15O43692 258 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 PPFIA4O75335 1185 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 DGKIO75912 1065 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 APPP05067 770 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 HOXC8P31273 242 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 MTMR3Q13615 1198 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 HSP90AB4PQ58FF6 505 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 ZSCAN25Q6NSZ9 544 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 UBALD2Q8IYN6 164 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 DCAF4Q8WV16 495 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 APBB2Q92870 758 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 KIF1BPQ96EK5 621 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 TAAR1Q96RJ0 339 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 C16orf70Q9BSU1 422 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 APOL5Q9BWW9 433 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 COL20A1Q9P218 1284 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 CDH22Q9UJ99 828 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 SORCS3Q9UPU3 1222 aa9.76□□□□□ -0.85
CLIP1-206ENST00000535290 DMXL1Q9Y485 3027 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 GPAA1O43292 621 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 PPFIA3O75145 1194 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 CAND2O75155 1236 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 LMNAP02545 664 aaKnown RBP9.75□□□□□ -0.85
CLIP1-206ENST00000535290 SMIM10L2AP0DMW4 78 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 SMIM10L2BP0DMW5 78 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 RLBP1P12271 317 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 CLCN5P51795 746 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 STXBP2Q15833 593 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 HSDL1Q3SXM5 330 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 NAALADL2Q58DX5 795 aa9.75□□□□□ -0.85
CLIP1-206ENST00000535290 ZKSCAN2Q63HK3 967 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms