RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 CCDC171Q6TFL3 1326 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 WDR33Q9C0J8 1336 aaKnown RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 SPEF2Q9C093 1822 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ETV2O00321 342 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 LARGE1O95461 756 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 DDX58O95786 925 aaKnown RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 MAP4K4O95819 1239 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 SRFP11831 508 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 GLDCP23378 1020 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 TRHRP34981 398 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 YARSP54577 528 aaKnown RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 TSPYL5Q86VY4 417 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 TICAM2Q86XR7 235 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 PDZD8Q8NEN9 1154 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 RUFY2Q8WXA3 655 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ZNF496Q96IT1 587 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 RNF32Q9H0A6 362 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 C9orf78Q9NZ63 289 aaPredicted RBP7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 LIMCH1Q9UPQ0 1083 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 TOGARAM1Q9Y4F4 1720 aa7.04□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ANKRD33BA6NCL7 494 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 UPK3BL1B0FP48 263 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 UPK3BL2E5RIL1 263 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 HIP1O00291 1037 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 BPNT1O95861 308 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ZGLP1P0C6A0 271 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ST13P50502 369 aaKnown RBP7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 SLC39A6Q13433 755 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 TAF1CQ15572 869 aaPredicted RBP7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ADCK5Q3MIX3 580 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 CIAPIN1Q6FI81 312 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 CWC27Q6UX04 472 aaKnown RBP7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 CCDC84Q86UT8 332 aaPredicted RBP7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 IFNL2Q8IZJ0 200 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 LILRA2Q8N149 483 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 OXR1Q8N573 874 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 PHC3Q8NDX5 983 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 KCNN1Q92952 543 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 ZSCAN31Q96LW9 406 aaPredicted RBP7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 PARP2Q9UGN5 583 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 MTMR6Q9Y217 621 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 DDX60Q8IY21 1712 aaKnown RBP7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 LAMA4Q16363 1823 aa7.03□□□□□ -1.28
TNFRSF1A-206ENST00000535038 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 F13A1P00488 732 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SNRPA1P09661 255 aaKnown RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 IFIT2P09913 472 aaKnown RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ATP5JP18859 108 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SYT1P21579 422 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PSMD2Q13200 908 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NMIQ13287 307 aaPredicted RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CREB3L3Q68CJ9 461 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 LILRA6Q6PI73 481 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 COPS6Q7L5N1 327 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 AACSQ86V21 672 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZSCAN30Q86W11 494 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 AMIGO3Q86WK7 504 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 RNF141Q8WVD5 230 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 RAPGEF4Q8WZA2 1011 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DHX38Q92620 1227 aaKnown RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SYTL4Q96C24 671 aaPredicted RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 GPATCH3Q96I76 525 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FUCA2Q9BTY2 467 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SMG5Q9UPR3 1016 aaKnown RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 RBM8AQ9Y5S9 174 aaKnown RBP7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 USP16Q9Y5T5 823 aa7.02□□□□□ -1.29
TNFRSF1A-206ENST00000535038 MYH15Q9Y2K3 1946 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 A0A0D9SFI3 127 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZBTB7CA1YPR0 619 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SLC27A2O14975 620 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 STX6O43752 255 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TAF5LO75529 589 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PDIA4P13667 645 aaKnown RBP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 CPA1P15085 419 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TNNI2P48788 182 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZC3H6P61129 1189 aaKnown RBP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FOXO4P98177 505 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 G3BP1Q13283 466 aaKnown RBP eCLIP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ME3Q16798 604 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 TMEM201Q5SNT2 666 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 BNC2Q6ZN30 1099 aaPredicted RBP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 USP48Q86UV5 1035 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SLFN12Q8IYM2 578 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 FAM227BQ96M60 508 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SP110Q9HB58 689 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 GPR108Q9NPR9 543 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DIAPH3Q9NSV4 1193 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 HMG20BQ9P0W2 317 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 DBNLQ9UJU6 430 aaKnown RBP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 NOL7Q9UMY1 257 aaKnown RBP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PCDHA11Q9Y5I1 949 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 ZNF609O15014 1411 aa7.01□□□□□ -1.29
TNFRSF1A-206ENST00000535038 STRCQ7RTU9 1775 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 COL5A2P05997 1499 aaPredicted RBP7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 PALLDQ8WX93 1383 aa7□□□□□ -1.29
TNFRSF1A-206ENST00000535038 SYCE3A1L190 88 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms