RNA–Protein interactions for RNA: ENST00000534946.5

LMO3-211, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-211ENST00000534946 ELP1O95163 1332 aa13.3□□□□□ -0.28
LMO3-211ENST00000534946 BRCA2P51587 3418 aa13.3□□□□□ -0.28
LMO3-211ENST00000534946 A6NJR5 290 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 H3BQV1 296 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 MEIS1O00470 390 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 NOP56O00567 594 aaKnown RBP13.29□□□□□ -0.28
LMO3-211ENST00000534946 HSP90AA1P07900 732 aaKnown RBP13.29□□□□□ -0.28
LMO3-211ENST00000534946 PDIA4P13667 645 aaKnown RBP13.29□□□□□ -0.28
LMO3-211ENST00000534946 ACLYP53396 1101 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 ORC2Q13416 577 aaPredicted RBP13.29□□□□□ -0.28
LMO3-211ENST00000534946 DGKDQ16760 1214 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 LY6KQ17RY6 165 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 PLA2G4DQ86XP0 818 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 PAWRQ96IZ0 340 aaKnown RBP13.29□□□□□ -0.28
LMO3-211ENST00000534946 KATNAL1Q9BW62 490 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 KCNH7Q9NS40 1196 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 NFASCO94856 1347 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 MROH7Q68CQ1 1323 aa13.29□□□□□ -0.28
LMO3-211ENST00000534946 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
LMO3-211ENST00000534946 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 ASGR1P07306 291 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 MMP3P08254 477 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 KCNA2P16389 499 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 KCNA10Q16322 511 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 MYSM1Q5VVJ2 828 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 CCSAPQ6IQ19 270 aaPredicted RBP13.28□□□□□ -0.28
LMO3-211ENST00000534946 PIK3AP1Q6ZUJ8 805 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 SPATA33Q96N06 139 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 MTG1Q9BT17 334 aaPredicted RBP13.28□□□□□ -0.28
LMO3-211ENST00000534946 STARD7Q9NQZ5 370 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 TBC1D22BQ9NU19 505 aa13.28□□□□□ -0.28
LMO3-211ENST00000534946 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.28
LMO3-211ENST00000534946 IGLV3-22A0A075B6J6 115 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 CYP3A7-CYP3A51PA0A087WV96 503 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 A0A0U1RQG5 324 aaPredicted RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 FAM86B1E9PN63 330 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 CTAGE5O15320 804 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 HOXD8P13378 290 aaPredicted RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 CYP3A7P24462 503 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 TRAPPC10P48553 1259 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 FOSBP53539 338 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 MLLT1Q03111 559 aaPredicted RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 SEMA3FQ13275 785 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 BECN1Q14457 450 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 INF2Q27J81 1249 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 Q4G0T1 1027 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 PRR16Q569H4 304 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 PPP4R3AQ6IN85 833 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 DIS3LQ8TF46 1054 aaKnown RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 AFG1LQ8WV93 481 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 AGO4Q9HCK5 861 aaKnown RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 JPH1Q9HDC5 661 aaPredicted RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 GJB4Q9NTQ9 266 aa13.27□□□□□ -0.29
LMO3-211ENST00000534946 NOL7Q9UMY1 257 aaKnown RBP13.27□□□□□ -0.29
LMO3-211ENST00000534946 MYADML2A6NDP7 307 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 BTBD18B2RXH4 712 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 IPO5O00410 1097 aaKnown RBP13.26□□□□□ -0.29
LMO3-211ENST00000534946 PPFIA4O75335 1185 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 PURAQ00577 322 aaKnown RBP13.26□□□□□ -0.29
LMO3-211ENST00000534946 BEX3Q00994 111 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 KRT76Q01546 638 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 NR5A1Q13285 461 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 SNX17Q15036 470 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 LETM2Q2VYF4 491 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 COPS5Q92905 334 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 MBOAT7Q96N66 472 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 RIT2Q99578 217 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 ZNF577Q9BSK1 485 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 SENP6Q9GZR1 1112 aaPredicted RBP13.26□□□□□ -0.29
LMO3-211ENST00000534946 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
LMO3-211ENST00000534946 DDX25Q9UHL0 483 aaKnown RBP13.26□□□□□ -0.29
LMO3-211ENST00000534946 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
LMO3-211ENST00000534946 TBX3O15119 743 aa13.25□□□□□ -0.29
LMO3-211ENST00000534946 F2P00734 622 aa13.25□□□□□ -0.29
LMO3-211ENST00000534946 MYL3P08590 195 aa13.25□□□□□ -0.29
LMO3-211ENST00000534946 U2AF2P26368 475 aaKnown RBP eCLIP13.25□□□□□ -0.29
LMO3-211ENST00000534946 SP2Q02086 613 aa13.25□□□□□ -0.29
LMO3-211ENST00000534946 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
LMO3-211ENST00000534946 LARP1BQ659C4 914 aaKnown RBP13.25□□□□□ -0.29
LMO3-211ENST00000534946 SMAP1Q8IYB5 467 aaPredicted RBP13.25□□□□□ -0.29
LMO3-211ENST00000534946 LENG9Q96B70 501 aa13.25□□□□□ -0.29
LMO3-211ENST00000534946 EMSYQ7Z589 1322 aa13.24□□□□□ -0.29
LMO3-211ENST00000534946 ADAMTS3O15072 1205 aa13.24□□□□□ -0.29
LMO3-211ENST00000534946 CCNT1O60563 726 aaKnown RBP13.24□□□□□ -0.29
LMO3-211ENST00000534946 ARP10275 920 aa13.24□□□□□ -0.29
LMO3-211ENST00000534946 PSEN1P49768 467 aa13.24□□□□□ -0.29
LMO3-211ENST00000534946 PTPN11Q06124 597 aaPredicted RBP13.24□□□□□ -0.29
LMO3-211ENST00000534946 HSDL1Q3SXM5 330 aa13.24□□□□□ -0.29
LMO3-211ENST00000534946 TMEM63BQ5T3F8 832 aa13.24□□□□□ -0.29
LMO3-211ENST00000534946 ZNF746Q6NUN9 644 aaPredicted RBP13.24□□□□□ -0.29
LMO3-211ENST00000534946 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms