RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 POTEFA5A3E0 1075 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 DHX15O43143 795 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RGS20O76081 388 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 CYP4A11Q02928 519 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 FSTL1Q12841 308 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 UVSSAQ2YD98 709 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 POTEGQ6S5H5 508 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 B3GNT9Q6UX72 402 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ANKRD13CQ8N6S4 541 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 GTF3C2Q8WUA4 911 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 INPP4AQ96PE3 977 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 EIF2AK1Q9BQI3 630 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 NAT10Q9H0A0 1025 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 POTEB2H3BUK9 544 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RPA1P27694 616 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 COPB2P35606 906 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 WDR78Q5VTH9 848 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 DHX40Q8IX18 779 aaKnown RBP22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 TRIM9Q9C026 710 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RGL1Q9NZL6 768 aa22.78■■□□□ 1.24
TNFRSF1A-205ENST00000534885 E9PMD0 336 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ATP9AO75110 1047 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RPN1P04843 607 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ALDH5A1P51649 535 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 RGMBQ6NW40 437 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 SV2BQ7L1I2 683 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 AOPEPQ8N6M6 819 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 FAM133AQ8N9E0 248 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 EFCC1Q9HA90 598 aa22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 ZNFX1Q9P2E3 1918 aaKnown RBP22.77■■□□□ 1.24
TNFRSF1A-205ENST00000534885 SOWAHBA6NEL2 793 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SLC26A4O43511 780 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MYL1P05976 194 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PGK2P07205 417 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SEMA3FQ13275 785 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 GPRC5AQ8NFJ5 357 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MROH8Q9H579 483 aa22.77■■□□□ 1.23
TNFRSF1A-205ENST00000534885 GPRASP2Q96D09 838 aa22.76■■□□□ 1.23
TNFRSF1A-205ENST00000534885 IWS1Q96ST2 819 aa22.76■■□□□ 1.23
TNFRSF1A-205ENST00000534885 KLRC4O43908 158 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SMYD4Q8IYR2 804 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SHCBP1Q8NEM2 672 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PARK7Q99497 189 aaKnown RBP22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MMP19Q99542 508 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 HSD17B14Q9BPX1 270 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 C7orf25Q9BPX7 421 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 BPIFA3Q9BQP9 254 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 POLR3CQ9BUI4 534 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 STK24Q9Y6E0 443 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MYMKA6NI61 221 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 GCLCP48506 637 aaPredicted RBP22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PSMC6P62333 389 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 AMPD3Q01432 767 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 KCTD2Q14681 263 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 NLRX1Q86UT6 975 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SMC1BQ8NDV3 1235 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DYDC2Q96IM9 177 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 TLL2Q9Y6L7 1015 aa22.75■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DOCK5Q9H7D0 1870 aa22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 IGF2BP3O00425 579 aaKnown RBP eCLIP22.74■■□□□ 1.232e-6■■■□□ 18.3
TNFRSF1A-205ENST00000534885 CTTNQ14247 550 aaKnown RBP22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MLKLQ8NB16 471 aa22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 TBC1D22BQ9NU19 505 aa22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MORF4L1Q9UBU8 362 aa22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 ADD3Q9UEY8 706 aaKnown RBP22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 LRRC37A2A6NM11 1700 aa22.74■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DNAJC25-GNG10A0A024R161 153 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 BECN2A8MW95 431 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 AP5Z1O43299 807 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SLITRK3O94933 977 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 FCER1AP12319 257 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 ASIC1P78348 528 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 STXBP2Q15833 593 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 KMT5BQ4FZB7 885 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 FGD4Q96M96 766 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 STAM2O75886 525 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SSBP05455 408 aaKnown RBP eCLIP22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 SLC10A3P09131 477 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 CD44P16070 742 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 EDNRBP24530 442 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 CCNA1P78396 465 aa22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 RTN4Q9NQC3 1192 aaKnown RBP22.73■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MANSC4A6NHS7 340 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 GOLGA6L19H0YKK7 550 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MAFGO15525 162 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PLA2G4BP0C869 781 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PLCB2Q00722 1185 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 EPHA7Q15375 998 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DYMQ7RTS9 669 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 TPH2Q8IWU9 490 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 ANP32BQ92688 251 aaKnown RBP22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 TUFT1Q9NNX1 390 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 RMND1Q9NWS8 449 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 WRAP73Q9P2S5 460 aaPredicted RBP22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 PLXNB2O15031 1838 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 KCNB1Q14721 858 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 NCAPHQ15003 741 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 MIER3Q7Z3K6 550 aa22.72■■□□□ 1.23
TNFRSF1A-205ENST00000534885 DDX12PQ92771 950 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms