RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PRKAG3Q9UGI9 489 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 DOCK5Q9H7D0 1870 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 FRMPD4Q14CM0 1322 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 TRIOO75962 3097 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 SLC27A2O14975 620 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 GFRA3O60609 400 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 IRS1P35568 1242 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 TRAF1Q13077 416 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 PTPROQ16827 1216 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 BMP2KLQ5H9B9 411 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 IER5LQ5T953 404 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 CATIPQ7Z7H3 387 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 ADHFE1Q8IWW8 467 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 ZNF654Q8IZM8 581 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 TMTC2Q8N394 836 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 IL31RAQ8NI17 732 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 MRPL38Q96DV4 380 aaKnown RBP11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 C17orf80Q9BSJ5 609 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 SPZ1Q9BXG8 430 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 MUTYHQ9UIF7 546 aa11.65□□□□□ -0.54
CLSTN3-203ENST00000534830 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 GCOM1H8Y6P7 765 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 HAS3O00219 553 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 SH2B2O14492 632 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 DDAH1O94760 285 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 POLR2MP0CAP2 368 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 TGFB3P10600 412 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 CASTP20810 708 aaKnown RBP11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 HOXA13P31271 388 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 LIFRP42702 1097 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 SP2Q02086 613 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 LAMC2Q13753 1193 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 MYSM1Q5VVJ2 828 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 CREB3L3Q68CJ9 461 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 CNKSR3Q6P9H4 555 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 CENPQQ7L2Z9 268 aaPredicted RBP11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 SKAP1Q86WV1 359 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 HOMER1Q86YM7 354 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 CCDC155Q8N6L0 562 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 PPTC7Q8NI37 304 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 TMEM87BQ96K49 555 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 C5orf42Q9H799 3197 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 TECTAO75443 2155 aa11.64□□□□□ -0.55
CLSTN3-203ENST00000534830 ABHD14A-ACY1A0A1B0GW23 586 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 PRC1O43663 620 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 F2P00734 622 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 MCM5P33992 734 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 MRPS9P82933 396 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 RBL2Q08999 1139 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 GPNMBQ14956 572 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 PTGISQ16647 500 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 DGKDQ16760 1214 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 TIGD5Q53EQ6 642 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 TCEAL5Q5H9L2 206 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 CELF3Q5SZQ8 465 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 GDF6Q6KF10 455 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 CASC1Q6TDU7 716 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 LRRC8DQ7L1W4 858 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 SGMS1Q86VZ5 419 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 SRBD1Q8N5C6 995 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 GPKOWQ92917 476 aaPredicted RBP eCLIP11.63□□□□□ -0.554e-9■■■■■ 56.5
CLSTN3-203ENST00000534830 PABPC5Q96DU9 382 aaKnown RBP11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 MYL10Q9BUA6 226 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 CLDND1Q9NY35 253 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 MRVI1Q9Y6F6 885 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 PTPRZ1P23471 2315 aaPredicted RBP11.63□□□□□ -0.55
CLSTN3-203ENST00000534830 PIK3CDO00329 1044 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 MEIS2O14770 477 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 PPFIA4O75335 1185 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 STAM2O75886 525 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 SELPP16109 830 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 CCND2P30279 289 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 ICAM3P32942 547 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 KIF5BP33176 963 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 IKBKEQ14164 716 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 TCTN1Q2MV58 587 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 HSDL1Q3SXM5 330 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 TSGA10IPQ3SY00 556 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 DHX37Q8IY37 1157 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 DHX38Q92620 1227 aaKnown RBP11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 PBXIP1Q96AQ6 731 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 PRRX2Q99811 253 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 LZTS2Q9BRK4 669 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 FAM86C1Q9NVL1 165 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 HDAC6Q9UBN7 1215 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 GTF2IRD1Q9UHL9 959 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 INSL6Q9Y581 213 aa11.62□□□□□ -0.55
CLSTN3-203ENST00000534830 KAT6AQ92794 2004 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 RBAK-RBAKDNI3L0D1 243 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 NBNO60934 754 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 EFCAB14O75071 495 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 PLEKHA8P1O95397 391 aa11.61□□□□□ -0.55
CLSTN3-203ENST00000534830 UBA1P22314 1058 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms