RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 USP17L17D6RBQ6 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L19D6RCP7 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L20D6RJB6 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 UPP2O95045 317 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 TDP2O95551 362 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PYGLP06737 847 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 DNA2P51530 1060 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L24Q0WX57 530 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 CRYMQ14894 314 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 ECM1Q16610 540 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 USP17L6PQ6QN14 398 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 SRGAP1Q7Z6B7 1085 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 TRIM74Q86UV6 250 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 TRIM73Q86UV7 250 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PPFIBP1Q86W92 1011 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 RTKN2Q8IZC4 609 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 TRPM4Q8TD43 1214 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PPANQ9NQ55 473 aaKnown RBP9.99□□□□□ -0.81
SF3B2-216ENST00000534765 FBXO28Q9NVF7 368 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PI4KBQ9UBF8 816 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 PCDHA5Q9Y5H7 936 aa9.99□□□□□ -0.81
SF3B2-216ENST00000534765 SSC5DA1L4H1 1573 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 CTAGE9A4FU28 777 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 CTAGE5O15320 804 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TPD52L2O43399 206 aaKnown RBP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 CLTAP09496 248 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 ATP2C1P98194 919 aaPredicted RBP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TRAF1Q13077 416 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 SLF2Q8IX21 1173 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 SLC16A10Q8TF71 515 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 DPF2Q92785 391 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TRIM4Q9C037 500 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 MYOZ2Q9NPC6 264 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 HOOK1Q9UJC3 728 aaKnown RBP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 RBBP6Q7Z6E9 1792 aaKnown RBP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 SMCO2A6NFE2 343 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 HGSO14964 777 aaPredicted RBP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 NDUFB10O96000 172 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TUBB4AP04350 444 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 SYKP43405 635 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TBC1D8BQ0IIM8 1120 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 ATL3Q6DD88 541 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 SND1Q7KZF4 910 aaKnown RBP eCLIP9.98□□□□□ -0.81
SF3B2-216ENST00000534765 ITFG2Q969R8 447 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 MTMR8Q96EF0 704 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 BCAS3Q9H6U6 928 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 RLFQ13129 1914 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 F5H6K3 240 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 GGCXP38435 758 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TGFB2P61812 414 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 KLRC3Q07444 240 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 ADCY2Q08462 1091 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 DBN1Q16643 649 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 TCP11Q8WWU5 503 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 BLZF1Q9H2G9 400 aa9.98□□□□□ -0.81
SF3B2-216ENST00000534765 PAPPA2Q9BXP8 1791 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 KLHL33A6NCF5 533 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 MYO1BO43795 1136 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 YBX3P16989 372 aaKnown RBP eCLIP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 GMPSP49915 693 aaPredicted RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 HDLBPQ00341 1268 aaKnown RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 RILPL1Q5EBL4 403 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 FANCLQ9NW38 375 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 E7EVH7 732 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 POLD1P28340 1107 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 PPP1R7Q15435 360 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 CCDC26Q8TAB7 109 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 CYP2W1Q8TAV3 490 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 MMTAG2Q9BU76 263 aaKnown RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 IMPACTQ9P2X3 320 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 COL11A1P12107 1806 aaPredicted RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 LRRIQ3A6PVS8 624 aaPredicted RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 CCDC175P0C221 793 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 CNGA1P29973 690 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 AFMP43652 599 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 IRAK1P51617 712 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 KLHL10Q6JEL2 608 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 TRMT44Q8IYL2 757 aaKnown RBP9.97□□□□□ -0.81
SF3B2-216ENST00000534765 WASF1Q92558 559 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 RMI1Q9H9A7 625 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 TUBE1Q9UJT0 475 aa9.97□□□□□ -0.81
SF3B2-216ENST00000534765 GOLGA6L9A6NEM1 432 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 BACH1O14867 736 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 CUTAO60888 179 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 NAPAP54920 295 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 POLE2P56282 527 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 QRICH1Q2TAL8 776 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 BEND6Q5SZJ8 279 aaPredicted RBP9.96□□□□□ -0.81
SF3B2-216ENST00000534765 NCAPH2Q6IBW4 605 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 C3orf20Q8ND61 904 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 TBCKQ8TEA7 893 aa9.96□□□□□ -0.81
SF3B2-216ENST00000534765 TMX4Q9H1E5 349 aaPredicted RBP9.96□□□□□ -0.81
SF3B2-216ENST00000534765 TRIM75PA6NK02 468 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 KIF5BP33176 963 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 ICA1Q05084 483 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 PPP2R5BQ15173 497 aa9.96□□□□□ -0.82
SF3B2-216ENST00000534765 DLGAP5Q15398 846 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms