RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 CYFIP1Q7L576 1253 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 LENG9Q96B70 501 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 SENP6Q9GZR1 1112 aaPredicted RBP27.46■■□□□ 1.99
SIPA1-210ENST00000534406 POLR3EQ9NVU0 708 aa27.46■■□□□ 1.99
SIPA1-210ENST00000534406 NFASCO94856 1347 aa27.45■■□□□ 1.99
SIPA1-210ENST00000534406 CYP3A7-CYP3A51PA0A087WV96 503 aa27.45■■□□□ 1.98
SIPA1-210ENST00000534406 NOP56O00567 594 aaKnown RBP27.45■■□□□ 1.98
SIPA1-210ENST00000534406 PDCP20941 246 aa27.45■■□□□ 1.98
SIPA1-210ENST00000534406 CYP3A7P24462 503 aa27.45■■□□□ 1.98
SIPA1-210ENST00000534406 LARP1BQ659C4 914 aaKnown RBP27.45■■□□□ 1.98
SIPA1-210ENST00000534406 FERMT2Q96AC1 680 aa27.45■■□□□ 1.98
SIPA1-210ENST00000534406 SDF4Q9BRK5 362 aa27.45■■□□□ 1.98
SIPA1-210ENST00000534406 DNAH12Q6ZR08 3092 aa27.45■■□□□ 1.98
SIPA1-210ENST00000534406 KPNA6O60684 536 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 MYL3P08590 195 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 CXCL17Q6UXB2 119 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 NOSTRINQ8IVI9 506 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 GLT1D1Q96MS3 346 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 MBOAT7Q96N66 472 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 ZNF577Q9BSK1 485 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 BCAS3Q9H6U6 928 aa27.44■■□□□ 1.98
SIPA1-210ENST00000534406 DDX25Q9UHL0 483 aaKnown RBP27.44■■□□□ 1.98
SIPA1-210ENST00000534406 IPO5O00410 1097 aaKnown RBP27.43■■□□□ 1.98
SIPA1-210ENST00000534406 CABYRO75952 493 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 ITGB3BPQ13352 177 aaPredicted RBP27.43■■□□□ 1.98
SIPA1-210ENST00000534406 DGKDQ16760 1214 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 HSDL1Q3SXM5 330 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 Q4G0T1 1027 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 MCTP1Q6DN14 999 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 HTATIP2Q9BUP3 242 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 JPH1Q9HDC5 661 aaPredicted RBP27.43■■□□□ 1.98
SIPA1-210ENST00000534406 STARD7Q9NQZ5 370 aa27.43■■□□□ 1.98
SIPA1-210ENST00000534406 KIF28PB7ZC32 967 aa27.42■■□□□ 1.98
SIPA1-210ENST00000534406 HOXD8P13378 290 aaPredicted RBP27.42■■□□□ 1.98
SIPA1-210ENST00000534406 U2AF2P26368 475 aaKnown RBP eCLIP27.42■■□□□ 1.98
SIPA1-210ENST00000534406 PURAQ00577 322 aaKnown RBP27.42■■□□□ 1.98
SIPA1-210ENST00000534406 SP4Q02446 784 aa27.42■■□□□ 1.98
SIPA1-210ENST00000534406 PPP4R3AQ6IN85 833 aa27.42■■□□□ 1.98
SIPA1-210ENST00000534406 SCN10AQ9Y5Y9 1956 aa27.42■■□□□ 1.98
SIPA1-210ENST00000534406 ALPK3Q96L96 1907 aa27.41■■□□□ 1.98
SIPA1-210ENST00000534406 CCNT1O60563 726 aaKnown RBP27.41■■□□□ 1.98
SIPA1-210ENST00000534406 GPR20Q99678 358 aa27.41■■□□□ 1.98
SIPA1-210ENST00000534406 MTG1Q9BT17 334 aaPredicted RBP27.41■■□□□ 1.98
SIPA1-210ENST00000534406 SLC9A2Q9UBY0 812 aa27.41■■□□□ 1.98
SIPA1-210ENST00000534406 ELP1O95163 1332 aa27.41■■□□□ 1.98
SIPA1-210ENST00000534406 MSH4O15457 936 aa27.4■■□□□ 1.98
SIPA1-210ENST00000534406 SLC37A4O43826 429 aa27.4■■□□□ 1.98
SIPA1-210ENST00000534406 VTI1AQ96AJ9 217 aa27.4■■□□□ 1.98
SIPA1-210ENST00000534406 UIMC1Q96RL1 719 aa27.4■■□□□ 1.98
SIPA1-210ENST00000534406 TBC1D22BQ9NU19 505 aa27.4■■□□□ 1.98
SIPA1-210ENST00000534406 TCEAL9Q9UHQ7 104 aa27.4■■□□□ 1.98
SIPA1-210ENST00000534406 NOL7Q9UMY1 257 aaKnown RBP27.4■■□□□ 1.98
SIPA1-210ENST00000534406 VPS37CA5D8V6 355 aaPredicted RBP27.39■■□□□ 1.98
SIPA1-210ENST00000534406 ATN1P54259 1190 aaPredicted RBP27.39■■□□□ 1.98
SIPA1-210ENST00000534406 BECN1Q14457 450 aa27.39■■□□□ 1.98
SIPA1-210ENST00000534406 A0A0U1RQG5 324 aaPredicted RBP27.38■■□□□ 1.97
SIPA1-210ENST00000534406 DDX39AO00148 427 aaKnown RBP27.38■■□□□ 1.97
SIPA1-210ENST00000534406 PPFIA4O75335 1185 aa27.38■■□□□ 1.97
SIPA1-210ENST00000534406 ZNF286BP0CG31 522 aa27.38■■□□□ 1.97
SIPA1-210ENST00000534406 SLC39A5Q6ZMH5 540 aa27.38■■□□□ 1.97
SIPA1-210ENST00000534406 ETNPPLQ8TBG4 499 aa27.38■■□□□ 1.97
SIPA1-210ENST00000534406 SLC5A5Q92911 643 aa27.38■■□□□ 1.97
SIPA1-210ENST00000534406 DHX15O43143 795 aaKnown RBP27.37■■□□□ 1.97
SIPA1-210ENST00000534406 GAS7O60861 476 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 SYT1P21579 422 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 TRAPPC10P48553 1259 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 SNX17Q15036 470 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 LRRC26Q2I0M4 334 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 LRCH2Q5VUJ6 765 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 SEPT1Q8WYJ6 367 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 RIT2Q99578 217 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 TELO2Q9Y4R8 837 aa27.37■■□□□ 1.97
SIPA1-210ENST00000534406 NEMFO60524 1076 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 F2P00734 622 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 LGALS2P05162 132 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 ATP2B1P20020 1258 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 ACTR2P61160 394 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 PSMC6P62333 389 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 KRT76Q01546 638 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 MLLT1Q03111 559 aaPredicted RBP27.36■■□□□ 1.97
SIPA1-210ENST00000534406 POTEDQ86YR6 584 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 KATNAL1Q9BW62 490 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 TEKT3Q9BXF9 490 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 KCNMB3Q9NPA1 279 aa27.36■■□□□ 1.97
SIPA1-210ENST00000534406 WNT7AO00755 349 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 TBX3O15119 743 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 TCF7P36402 384 aaPredicted RBP27.35■■□□□ 1.97
SIPA1-210ENST00000534406 RTP1P59025 263 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 ITGA7Q13683 1181 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 TTC38Q5R3I4 469 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 C1orf53Q5VUE5 145 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 FAM20AQ96MK3 541 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 PDE4DIPQ5VU43 2346 aa27.35■■□□□ 1.97
SIPA1-210ENST00000534406 GSTTP1A0A1W2PQM5 241 aa27.34■■□□□ 1.97
SIPA1-210ENST00000534406 CCNE2O96020 404 aa27.34■■□□□ 1.97
SIPA1-210ENST00000534406 ORC2Q13416 577 aaPredicted RBP27.34■■□□□ 1.97
SIPA1-210ENST00000534406 TRIM60Q495X7 471 aa27.34■■□□□ 1.97
SIPA1-210ENST00000534406 UTP14CQ5TAP6 766 aaKnown RBP27.34■■□□□ 1.97
SIPA1-210ENST00000534406 ZNF746Q6NUN9 644 aaPredicted RBP27.34■■□□□ 1.97
SIPA1-210ENST00000534406 SPRYD3Q8NCJ5 442 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms