RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 DGKDQ16760 1214 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 UTP14CQ5TAP6 766 aaKnown RBP15.26■□□□□ 0.03
CMTM1-219ENST00000533953 METTL7BQ6UX53 244 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 ANKRD33Q7Z3H0 272 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 PLA2G4DQ86XP0 818 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 TRIM50Q86XT4 487 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 FAM126BQ8IXS8 530 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 TBCKQ8TEA7 893 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 GJA10Q969M2 543 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 TMX3Q96JJ7 454 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 GPR20Q99678 358 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 AGO4Q9HCK5 861 aaKnown RBP15.26■□□□□ 0.03
CMTM1-219ENST00000533953 TRMT13Q9NUP7 481 aaKnown RBP15.26■□□□□ 0.03
CMTM1-219ENST00000533953 TMEM39AQ9NV64 488 aa15.26■□□□□ 0.03
CMTM1-219ENST00000533953 COLQQ9Y215 455 aaPredicted RBP15.26■□□□□ 0.03
CMTM1-219ENST00000533953 IGLV3-22A0A075B6J6 115 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 GSTTP1A0A1W2PQM5 241 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 DCDC2CA8MYV0 355 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 NOP56O00567 594 aaKnown RBP15.25■□□□□ 0.03
CMTM1-219ENST00000533953 ST18O60284 1047 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 B4GALT4O60513 344 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 KPNA6O60684 536 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 CLTBP09497 229 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 MAGEA10P43363 369 aaPredicted RBP15.25■□□□□ 0.03
CMTM1-219ENST00000533953 PSEN2P49810 448 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 NR5A1Q13285 461 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 INF2Q27J81 1249 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 PRR16Q569H4 304 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 KRT40Q6A162 431 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 SENP7Q9BQF6 1050 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 C16orf70Q9BSU1 422 aa15.25■□□□□ 0.03
CMTM1-219ENST00000533953 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
CMTM1-219ENST00000533953 PPFIA4O75335 1185 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 TDP2O95551 362 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 CD4P01730 458 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 CYP2C9P11712 490 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 ZNF200P98182 395 aaPredicted RBP15.24■□□□□ 0.03
CMTM1-219ENST00000533953 HIC1Q14526 733 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 MFSD10Q14728 455 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 TEX2Q8IWB9 1127 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 WASF1Q92558 559 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 BADQ92934 168 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 TOX2Q96NM4 488 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 PPP1R12CQ9BZL4 782 aa15.24■□□□□ 0.03
CMTM1-219ENST00000533953 UMODL1Q5DID0 1318 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 BTBD18B2RXH4 712 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 LGALS2P05162 132 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 HOXD8P13378 290 aaPredicted RBP15.23■□□□□ 0.03
CMTM1-219ENST00000533953 XBP1P17861 261 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 KIAA0753Q2KHM9 967 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 MCTP2Q6DN12 878 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 PIK3AP1Q6ZUJ8 805 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 CDHR1Q96JP9 859 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 HDAC6Q9UBN7 1215 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 PRKAG2Q9UGJ0 569 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 TBX21Q9UL17 535 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 KIAA1217Q5T5P2 1943 aa15.23■□□□□ 0.03
CMTM1-219ENST00000533953 HAS3O00219 553 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 DHX15O43143 795 aaKnown RBP15.22■□□□□ 0.03
CMTM1-219ENST00000533953 CCNE2O96020 404 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 F2P00734 622 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 CIITAP33076 1130 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 CYP2C18P33260 490 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
CMTM1-219ENST00000533953 NONOQ15233 471 aaKnown RBP eCLIP15.22■□□□□ 0.03
CMTM1-219ENST00000533953 GALNT17Q6IS24 598 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
CMTM1-219ENST00000533953 KRT25Q7Z3Z0 450 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 SEPT1Q8WYJ6 367 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 TNFRSF25Q93038 417 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 LENG9Q96B70 501 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 PCYT2Q99447 389 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 GDF15Q99988 308 aa15.22■□□□□ 0.03
CMTM1-219ENST00000533953 LLPHQ9BRT6 129 aaKnown RBP15.22■□□□□ 0.03
CMTM1-219ENST00000533953 DNAH12Q6ZR08 3092 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 H3BRB1 525 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 IPO5O00410 1097 aaKnown RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 KIAA0355O15063 1070 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 TLR3O15455 904 aaKnown RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 MSH4O15457 936 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 MAFGO15525 162 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 MMP1P03956 469 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 RAG1P15918 1043 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 MARK3P27448 753 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 KRT2P35908 639 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 USP11P51784 963 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 EPHB4P54760 987 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 ACTR2P61160 394 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 LETM2Q2VYF4 491 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 NIPA1Q7RTP0 329 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 DIS3L2Q8IYB7 885 aaKnown RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 GIMAP8Q8ND71 665 aaPredicted RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 C8orf76Q96K31 380 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 CTAGE1Q96RT6 745 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 LBHD1Q9BQE6 289 aaPredicted RBP15.21■□□□□ 0.03
CMTM1-219ENST00000533953 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
CMTM1-219ENST00000533953 RNPEPQ9H4A4 650 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms