RNA–Protein interactions for RNA: ENST00000533877.1

FAM220A-204, Transcript of family with sequence similarity 220 member A, human

TSL 4

Gene FAM220A, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM220A-204	ENST00000533877	FBXO18	Q8NFZ0	1043 aa		31.51	■■■□□ 2.63
FAM220A-204	ENST00000533877	SMC3	Q9UQE7	1217 aa		31.51	■■■□□ 2.63
FAM220A-204	ENST00000533877	NOP56	O00567	594 aa	Known RBP	31.5	■■■□□ 2.63
FAM220A-204	ENST00000533877	RTP1	P59025	263 aa		31.5	■■■□□ 2.63
FAM220A-204	ENST00000533877	CUL4A	Q13619	759 aa		31.5	■■■□□ 2.63
FAM220A-204	ENST00000533877	SNX17	Q15036	470 aa		31.5	■■■□□ 2.63
FAM220A-204	ENST00000533877	PRR16	Q569H4	304 aa		31.5	■■■□□ 2.63
FAM220A-204	ENST00000533877	SNX21	Q969T3	373 aa		31.5	■■■□□ 2.63
FAM220A-204	ENST00000533877		A0A0U1RQG5	324 aa	Predicted RBP	31.49	■■■□□ 2.63
FAM220A-204	ENST00000533877	GJB2	P29033	226 aa		31.49	■■■□□ 2.63
FAM220A-204	ENST00000533877	SET	Q01105	290 aa	Predicted RBP	31.49	■■■□□ 2.63
FAM220A-204	ENST00000533877	SDF4	Q9BRK5	362 aa		31.49	■■■□□ 2.63
FAM220A-204	ENST00000533877	ATP11B	Q9Y2G3	1177 aa		31.49	■■■□□ 2.63
FAM220A-204	ENST00000533877	PSMC6	P62333	389 aa		31.48	■■■□□ 2.63
FAM220A-204	ENST00000533877	ITGA7	Q13683	1181 aa		31.48	■■■□□ 2.63
FAM220A-204	ENST00000533877	TNFRSF25	Q93038	417 aa		31.48	■■■□□ 2.63
FAM220A-204	ENST00000533877	GPR20	Q99678	358 aa		31.48	■■■□□ 2.63
FAM220A-204	ENST00000533877	NR2E3	Q9Y5X4	410 aa		31.48	■■■□□ 2.63
FAM220A-204	ENST00000533877	CYP3A7-CYP3A51P	A0A087WV96	503 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	ARVCF	O00192	962 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	HOXD8	P13378	290 aa	Predicted RBP	31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	CYP3A7	P24462	503 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	SP4	Q02446	784 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	TRIM60	Q495X7	471 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	EARS2	Q5JPH6	523 aa	Known RBP	31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	C7orf61	Q8IZ16	206 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877	NFASC	O94856	1347 aa		31.47	■■■□□ 2.63
FAM220A-204	ENST00000533877		K7ELQ4	463 aa	Predicted RBP	31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	CDK7	P50613	346 aa		31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	ITGB3BP	Q13352	177 aa	Predicted RBP	31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	LETM2	Q2VYF4	491 aa		31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	NEK8	Q86SG6	692 aa		31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	ZNF577	Q9BSK1	485 aa		31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	SEZ6L	Q9BYH1	1024 aa		31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	GRIN2D	O15399	1336 aa		31.46	■■■□□ 2.63
FAM220A-204	ENST00000533877	IPO5	O00410	1097 aa	Known RBP	31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	TLE2	Q04725	743 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877		Q4G0T1	1027 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	MOXD1	Q6UVY6	613 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	SLC43A3	Q8NBI5	491 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	LENG9	Q96B70	501 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	UIMC1	Q96RL1	719 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	JPH1	Q9HDC5	661 aa	Predicted RBP	31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	TELO2	Q9Y4R8	837 aa		31.45	■■■□□ 2.63
FAM220A-204	ENST00000533877	TNRC18	O15417	2968 aa	Predicted RBP	31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	TDP2	O95551	362 aa		31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	CHMP4BP1	P59074	171 aa		31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	SEPT1	Q8WYJ6	367 aa		31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	KAT2B	Q92831	832 aa		31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	NAP1L4	Q99733	375 aa	Known RBP	31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	FOXP1	Q9H334	677 aa	Predicted RBP	31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	TBC1D22B	Q9NU19	505 aa		31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	SLC9A2	Q9UBY0	812 aa		31.44	■■■□□ 2.62
FAM220A-204	ENST00000533877	FAM205C	A6NFA0	338 aa		31.43	■■■□□ 2.62
FAM220A-204	ENST00000533877	PQBP1	O60828	265 aa	Known RBP	31.43	■■■□□ 2.62
FAM220A-204	ENST00000533877	NBPF20	Q3BBV1	942 aa		31.43	■■■□□ 2.62
FAM220A-204	ENST00000533877	ANKRD33	Q7Z3H0	272 aa		31.43	■■■□□ 2.62
FAM220A-204	ENST00000533877	MBOAT7	Q96N66	472 aa		31.43	■■■□□ 2.62
FAM220A-204	ENST00000533877	TOX2	Q96NM4	488 aa		31.43	■■■□□ 2.62
FAM220A-204	ENST00000533877	MYH7B	A7E2Y1	1941 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	GSTTP1	A0A1W2PQM5	241 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	DCDC2C	A8MYV0	355 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	DHX15	O43143	795 aa	Known RBP	31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	ZNF286B	P0CG31	522 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	GNL2	Q13823	731 aa	Known RBP	31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	PPP4R3A	Q6IN85	833 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	HSCB	Q8IWL3	235 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	DDX25	Q9UHL0	483 aa	Known RBP	31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	MROH7	Q68CQ1	1323 aa		31.42	■■■□□ 2.62
FAM220A-204	ENST00000533877	MSH4	O15457	936 aa		31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	CCNT1	O60563	726 aa	Known RBP	31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	GCFC2	P16383	781 aa	Known RBP	31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	PSEN2	P49810	448 aa		31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	UTP14C	Q5TAP6	766 aa	Known RBP	31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	C16orf70	Q9BSU1	422 aa		31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	KATNAL1	Q9BW62	490 aa		31.41	■■■□□ 2.62
FAM220A-204	ENST00000533877	DNAH12	Q6ZR08	3092 aa		31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877	DDX39A	O00148	427 aa	Known RBP	31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877	F2	P00734	622 aa		31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877	LGALS2	P05162	132 aa		31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877	TCF7	P36402	384 aa	Predicted RBP	31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877	LARP1B	Q659C4	914 aa	Known RBP	31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877	INTS4	Q96HW7	963 aa	Known RBP	31.4	■■■□□ 2.62
FAM220A-204	ENST00000533877		H3BQV1	296 aa		31.39	■■■□□ 2.62
FAM220A-204	ENST00000533877	ACTR2	P61160	394 aa		31.39	■■■□□ 2.62
FAM220A-204	ENST00000533877	MFSD10	Q14728	455 aa		31.39	■■■□□ 2.62
FAM220A-204	ENST00000533877	FAM47C	Q5HY64	1035 aa		31.39	■■■□□ 2.62
FAM220A-204	ENST00000533877	NFRKB	Q6P4R8	1299 aa		31.39	■■■□□ 2.62
FAM220A-204	ENST00000533877	SLC5A5	Q92911	643 aa		31.39	■■■□□ 2.62
FAM220A-204	ENST00000533877		H0YGN5	161 aa		31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877		H3BRB1	525 aa		31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877	TLR3	O15455	904 aa	Known RBP	31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877	KIAA0753	Q2KHM9	967 aa		31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877	PPP1R13L	Q8WUF5	828 aa		31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877	RIT2	Q99578	217 aa		31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877	TUT1	Q9H6E5	874 aa	Known RBP	31.38	■■■□□ 2.61
FAM220A-204	ENST00000533877	HAS3	O00219	553 aa		31.37	■■■□□ 2.61
FAM220A-204	ENST00000533877	PTPN11	Q06124	597 aa	Predicted RBP	31.37	■■■□□ 2.61
FAM220A-204	ENST00000533877	FAAP100	Q0VG06	881 aa		31.37	■■■□□ 2.61
FAM220A-204	ENST00000533877	NOSTRIN	Q8IVI9	506 aa		31.37	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms